RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 BACH2Q9BYV9 841 aa13□□□□□ -0.33
TGFB3-207ENST00000557493 GPR108Q9NPR9 543 aa13□□□□□ -0.33
TGFB3-207ENST00000557493 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
TGFB3-207ENST00000557493 ZNF609O15014 1411 aa12.99□□□□□ -0.33
TGFB3-207ENST00000557493 SF3B3Q15393 1217 aaKnown RBP12.99□□□□□ -0.33
TGFB3-207ENST00000557493 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
TGFB3-207ENST00000557493 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
TGFB3-207ENST00000557493 CCDC85AQ96PX6 553 aaPredicted RBP12.99□□□□□ -0.33
TGFB3-207ENST00000557493 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
TGFB3-207ENST00000557493 SPEF2Q9C093 1822 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 ERC2O15083 957 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
TGFB3-207ENST00000557493 EPHX2P34913 555 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 ECE1P42892 770 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 ST5P78524 1137 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 TFCP2Q12800 502 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
TGFB3-207ENST00000557493 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
TGFB3-207ENST00000557493 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
TGFB3-207ENST00000557493 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
TGFB3-207ENST00000557493 CAPNS2Q96L46 248 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
TGFB3-207ENST00000557493 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
TGFB3-207ENST00000557493 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
TGFB3-207ENST00000557493 GSPT1P15170 499 aaKnown RBP12.97□□□□□ -0.33
TGFB3-207ENST00000557493 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
TGFB3-207ENST00000557493 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 PRR5LQ6MZQ0 368 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 CNNM1Q9NRU3 951 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
TGFB3-207ENST00000557493 CEP126Q9P2H0 1117 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 SCN4AP35499 1836 aa12.97□□□□□ -0.33
TGFB3-207ENST00000557493 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 PDE4DIPQ5VU43 2346 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 AK9Q5TCS8 1911 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 CDC45O75419 566 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 LRRC24Q50LG9 513 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 CCDC93Q567U6 631 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 CCDC24Q8N4L8 307 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
TGFB3-207ENST00000557493 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
TGFB3-207ENST00000557493 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.33
TGFB3-207ENST00000557493 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
TGFB3-207ENST00000557493 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 GRM1Q13255 1194 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 ANKRD18AQ8IVF6 992 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 MCOLN1Q9GZU1 580 aa12.95□□□□□ -0.34
TGFB3-207ENST00000557493 CA12O43570 354 aa12.94□□□□□ -0.34
TGFB3-207ENST00000557493 SRGNP10124 158 aa12.94□□□□□ -0.34
TGFB3-207ENST00000557493 TSHZ3Q63HK5 1081 aa12.94□□□□□ -0.34
TGFB3-207ENST00000557493 CCDC8Q9H0W5 538 aaPredicted RBP12.94□□□□□ -0.34
TGFB3-207ENST00000557493 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
TGFB3-207ENST00000557493 TSKSQ9UJT2 592 aa12.94□□□□□ -0.34
TGFB3-207ENST00000557493 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
TGFB3-207ENST00000557493 THSD7BQ9C0I4 1608 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 SDSP20132 328 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 FKBP4Q02790 459 aaKnown RBP eCLIP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 ATP2B3Q16720 1220 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 ADAMTSL1Q8N6G6 1762 aa12.93□□□□□ -0.34
TGFB3-207ENST00000557493 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-207ENST00000557493 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
TGFB3-207ENST00000557493 MAP2K2P36507 400 aa12.92□□□□□ -0.34
TGFB3-207ENST00000557493 PUM3Q15397 648 aaKnown RBP12.92□□□□□ -0.34
TGFB3-207ENST00000557493 GPC2Q8N158 579 aa12.92□□□□□ -0.34
TGFB3-207ENST00000557493 VGLL2Q8N8G2 317 aa12.92□□□□□ -0.34
TGFB3-207ENST00000557493 C7orf43Q8WVR3 580 aa12.92□□□□□ -0.34
TGFB3-207ENST00000557493 DBNDD2Q9BQY9 259 aa12.92□□□□□ -0.34
TGFB3-207ENST00000557493 ANKRD31Q8N7Z5 1873 aa12.91□□□□□ -0.34
TGFB3-207ENST00000557493 PDE8BO95263 885 aa12.91□□□□□ -0.34
TGFB3-207ENST00000557493 ATP5JP18859 108 aa12.91□□□□□ -0.34
TGFB3-207ENST00000557493 TBC1D9Q6ZT07 1266 aa12.91□□□□□ -0.34
TGFB3-207ENST00000557493 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
TGFB3-207ENST00000557493 NEUROD6Q96NK8 337 aa12.91□□□□□ -0.34
TGFB3-207ENST00000557493 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
TGFB3-207ENST00000557493 COL4A1P02462 1669 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 FZD9O00144 591 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 SLC5A1P13866 664 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms