RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 USP17L3A6NCW0 530 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 USP17L4A6NCW7 530 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 USP17L8P0C7I0 530 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 KLRK1P26718 216 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 SOX10P56693 466 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 KSR2Q6VAB6 950 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 USP17L1Q7RTZ2 530 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
SLIRP-210ENST00000557431 UBE2Q2LH0YL09 131 aa18.13■□□□□ 0.49
SLIRP-210ENST00000557431 HSP90B1P14625 803 aaKnown RBP18.13■□□□□ 0.49
SLIRP-210ENST00000557431 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
SLIRP-210ENST00000557431 UBE3BQ7Z3V4 1068 aa18.13■□□□□ 0.49
SLIRP-210ENST00000557431 CDC5LQ99459 802 aaKnown RBP18.13■□□□□ 0.49
SLIRP-210ENST00000557431 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
SLIRP-210ENST00000557431 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
SLIRP-210ENST00000557431 SASH1O94885 1247 aa18.12■□□□□ 0.49
SLIRP-210ENST00000557431 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
SLIRP-210ENST00000557431 MKRN3Q13064 507 aaKnown RBP18.12■□□□□ 0.49
SLIRP-210ENST00000557431 DACT2Q5SW24 774 aa18.11■□□□□ 0.49
SLIRP-210ENST00000557431 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
SLIRP-210ENST00000557431 SAGE1Q9NXZ1 904 aa18.11■□□□□ 0.49
SLIRP-210ENST00000557431 PRKG1Q13976 671 aa18.1■□□□□ 0.49
SLIRP-210ENST00000557431 BSDC1Q9NW68 430 aaPredicted RBP18.1■□□□□ 0.49
SLIRP-210ENST00000557431 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
SLIRP-210ENST00000557431 FZD1Q9UP38 647 aa18.1■□□□□ 0.49
SLIRP-210ENST00000557431 PITPNM2Q9BZ72 1349 aa18.09■□□□□ 0.49
SLIRP-210ENST00000557431 SNAP23O00161 211 aa18.09■□□□□ 0.49
SLIRP-210ENST00000557431 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
SLIRP-210ENST00000557431 TTLL12Q14166 644 aaPredicted RBP18.09■□□□□ 0.49
SLIRP-210ENST00000557431 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
SLIRP-210ENST00000557431 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
SLIRP-210ENST00000557431 OTOFQ9HC10 1997 aa18.08■□□□□ 0.49
SLIRP-210ENST00000557431 TNRC18O15417 2968 aaPredicted RBP18.08■□□□□ 0.49
SLIRP-210ENST00000557431 WNT10BO00744 389 aa18.08■□□□□ 0.48
SLIRP-210ENST00000557431 SLC34A2O95436 690 aa18.08■□□□□ 0.48
SLIRP-210ENST00000557431 TBC1D8O95759 1140 aa18.08■□□□□ 0.48
SLIRP-210ENST00000557431 H7C1W4 665 aa18.07■□□□□ 0.48
SLIRP-210ENST00000557431 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
SLIRP-210ENST00000557431 ITGA6P23229 1130 aa18.07■□□□□ 0.48
SLIRP-210ENST00000557431 KIAA0825Q8IV33 1275 aa18.07■□□□□ 0.48
SLIRP-210ENST00000557431 SALL2Q9Y467 1007 aaPredicted RBP18.07■□□□□ 0.48
SLIRP-210ENST00000557431 PCDHAC2Q9Y5I4 1007 aa18.07■□□□□ 0.48
SLIRP-210ENST00000557431 LAMB1P07942 1786 aa18.07■□□□□ 0.48
SLIRP-210ENST00000557431 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
SLIRP-210ENST00000557431 WWC1Q8IX03 1113 aa18.06■□□□□ 0.48
SLIRP-210ENST00000557431 ZNF804BA4D1E1 1349 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 CASP7P55210 303 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 GTF2IP78347 998 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 FLIIQ13045 1269 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 GCKRQ14397 625 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 STRIP1Q5VSL9 837 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
SLIRP-210ENST00000557431 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
SLIRP-210ENST00000557431 TAF5LO75529 589 aa18.04■□□□□ 0.48
SLIRP-210ENST00000557431 FKBP1BP68106 108 aa18.04■□□□□ 0.48
SLIRP-210ENST00000557431 CHRNDQ07001 517 aa18.04■□□□□ 0.48
SLIRP-210ENST00000557431 TTLL5Q6EMB2 1281 aa18.04■□□□□ 0.48
SLIRP-210ENST00000557431 CTU1Q7Z7A3 348 aaKnown RBP18.04■□□□□ 0.48
SLIRP-210ENST00000557431 OGFOD1Q8N543 542 aa18.04■□□□□ 0.48
SLIRP-210ENST00000557431 JAG2Q9Y219 1238 aa18.04■□□□□ 0.48
SLIRP-210ENST00000557431 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
SLIRP-210ENST00000557431 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
SLIRP-210ENST00000557431 FKBP5Q13451 457 aaPredicted RBP18.03■□□□□ 0.48
SLIRP-210ENST00000557431 ZNF296Q8WUU4 475 aaPredicted RBP18.03■□□□□ 0.48
SLIRP-210ENST00000557431 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
SLIRP-210ENST00000557431 R3HDMLQ9H3Y0 253 aa18.03■□□□□ 0.48
SLIRP-210ENST00000557431 LEMD3Q9Y2U8 911 aa18.03■□□□□ 0.48
SLIRP-210ENST00000557431 SSC5DA1L4H1 1573 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 F6X3S4 739 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 F8W031 263 aaPredicted RBP18.02■□□□□ 0.48
SLIRP-210ENST00000557431 KCNJ4P48050 445 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 CERS5Q8N5B7 392 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 MPHOSPH8Q99549 860 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 PLA2G12BQ9BX93 195 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 CHMP3Q9Y3E7 222 aa18.02■□□□□ 0.48
SLIRP-210ENST00000557431 AOX1Q06278 1338 aa18.01■□□□□ 0.47
SLIRP-210ENST00000557431 MYO3BQ8WXR4 1341 aa18.01■□□□□ 0.47
SLIRP-210ENST00000557431 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
SLIRP-210ENST00000557431 HDAC9Q9UKV0 1011 aa18.01■□□□□ 0.47
SLIRP-210ENST00000557431 IRS2Q9Y4H2 1338 aa18■□□□□ 0.47
SLIRP-210ENST00000557431 CSF1RP07333 972 aa18■□□□□ 0.47
SLIRP-210ENST00000557431 NF2P35240 595 aa18■□□□□ 0.47
SLIRP-210ENST00000557431 ZBED3Q96IU2 234 aaPredicted RBP18■□□□□ 0.47
SLIRP-210ENST00000557431 CD209Q9NNX6 404 aa18■□□□□ 0.47
SLIRP-210ENST00000557431 ANGEL1Q9UNK9 670 aaKnown RBP18■□□□□ 0.47
SLIRP-210ENST00000557431 MYH13Q9UKX3 1938 aa18■□□□□ 0.47
SLIRP-210ENST00000557431 CCDC27Q2M243 656 aa17.99■□□□□ 0.47
SLIRP-210ENST00000557431 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
SLIRP-210ENST00000557431 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
SLIRP-210ENST00000557431 ANKRD2Q9GZV1 360 aa17.99■□□□□ 0.47
SLIRP-210ENST00000557431 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
SLIRP-210ENST00000557431 CLRN2A0PK11 232 aa17.98■□□□□ 0.47
SLIRP-210ENST00000557431 ANKRD18BA2A2Z9 1011 aa17.98■□□□□ 0.47
SLIRP-210ENST00000557431 FOXO4P98177 505 aa17.98■□□□□ 0.47
SLIRP-210ENST00000557431 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
SLIRP-210ENST00000557431 EPHA10Q5JZY3 1008 aa17.98■□□□□ 0.47
SLIRP-210ENST00000557431 ARMC9Q7Z3E5 817 aa17.98■□□□□ 0.47
SLIRP-210ENST00000557431 APOBEC3FQ8IUX4 373 aaKnown RBP17.98■□□□□ 0.47
SLIRP-210ENST00000557431 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 403.4 ms