RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 TSKSQ9UJT2 592 aa14.4□□□□□ -0.1
HNRNPC-231ENST00000557336 ADM5C9JUS6 153 aa14.39□□□□□ -0.11
HNRNPC-231ENST00000557336 CWF19L2Q2TBE0 894 aaKnown RBP14.39□□□□□ -0.11
HNRNPC-231ENST00000557336 RBM26Q5T8P6 1007 aaKnown RBP14.39□□□□□ -0.11
HNRNPC-231ENST00000557336 ANKIB1Q9P2G1 1089 aa14.39□□□□□ -0.11
HNRNPC-231ENST00000557336 GGA1Q9UJY5 639 aa14.39□□□□□ -0.11
HNRNPC-231ENST00000557336 NEURL1BA8MQ27 555 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 FAM155AB1AL88 458 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 H7C1W4 665 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 CTSWP56202 376 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 ZNF280AP59817 542 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 GREM2Q9H772 168 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 ZNF609O15014 1411 aa14.38□□□□□ -0.11
HNRNPC-231ENST00000557336 POLR2AP24928 1970 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 CASP7P55210 303 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 GSE1Q14687 1217 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 KIF4BQ2VIQ3 1234 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 RSBN1LQ6PCB5 846 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 ABHD8Q96I13 439 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 MINPP1Q9UNW1 487 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 XDHP47989 1333 aa14.37□□□□□ -0.11
HNRNPC-231ENST00000557336 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
HNRNPC-231ENST00000557336 HUNKP57058 714 aa14.36□□□□□ -0.11
HNRNPC-231ENST00000557336 TWISTNBQ3B726 338 aaPredicted RBP14.36□□□□□ -0.11
HNRNPC-231ENST00000557336 BSDC1Q9NW68 430 aaPredicted RBP14.36□□□□□ -0.11
HNRNPC-231ENST00000557336 IL16Q14005 1332 aa14.36□□□□□ -0.11
HNRNPC-231ENST00000557336 ATP2B4P23634 1241 aa14.35□□□□□ -0.11
HNRNPC-231ENST00000557336 TXNRD3Q86VQ6 643 aa14.35□□□□□ -0.11
HNRNPC-231ENST00000557336 AGBL3Q8NEM8 1001 aa14.35□□□□□ -0.11
HNRNPC-231ENST00000557336 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
HNRNPC-231ENST00000557336 GBA2Q9HCG7 927 aaPredicted RBP14.35□□□□□ -0.11
HNRNPC-231ENST00000557336 GGA3Q9NZ52 723 aa14.35□□□□□ -0.11
HNRNPC-231ENST00000557336 SCARF1Q14162 830 aa14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 GCKRQ14397 625 aa14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 UBE3BQ7Z3V4 1068 aa14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 DCPSQ96C86 337 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 BEGAINQ9BUH8 593 aa14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 MXD3Q9BW11 206 aa14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
HNRNPC-231ENST00000557336 USP17L3A6NCW0 530 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 USP17L4A6NCW7 530 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 VAMP4O75379 141 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 CSF1RP07333 972 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 KLRK1P26718 216 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 FLIIQ13045 1269 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 NOGQ13253 232 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 DACT2Q5SW24 774 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 RGMBQ6NW40 437 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 PODNQ7Z5L7 613 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 CDCA5Q96FF9 252 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 CDC5LQ99459 802 aaKnown RBP14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 PLA2G12BQ9BX93 195 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 STK31Q9BXU1 1019 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 SCAF8Q9UPN6 1271 aaKnown RBP14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 FANCIQ9NVI1 1328 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 MED23Q9ULK4 1368 aa14.33□□□□□ -0.12
HNRNPC-231ENST00000557336 PSME4Q14997 1843 aa14.32□□□□□ -0.12
HNRNPC-231ENST00000557336 CA12O43570 354 aa14.32□□□□□ -0.12
HNRNPC-231ENST00000557336 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
HNRNPC-231ENST00000557336 CCT4P50991 539 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-231ENST00000557336 ANGEL2Q5VTE6 544 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-231ENST00000557336 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
HNRNPC-231ENST00000557336 ZNF646O15015 1829 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 G3V3G9 751 aa14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 KIF23Q02241 960 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 NEXNQ0ZGT2 675 aa14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 FAM161AQ3B820 660 aa14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 C2orf69Q8N8R5 385 aa14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 IRS2Q9Y4H2 1338 aa14.31□□□□□ -0.12
HNRNPC-231ENST00000557336 SNAP23O00161 211 aa14.3□□□□□ -0.12
HNRNPC-231ENST00000557336 ITGA6P23229 1130 aa14.3□□□□□ -0.12
HNRNPC-231ENST00000557336 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
HNRNPC-231ENST00000557336 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
HNRNPC-231ENST00000557336 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
HNRNPC-231ENST00000557336 CASP8AP2Q9UKL3 1982 aa14.3□□□□□ -0.12
HNRNPC-231ENST00000557336 SLC10A3P09131 477 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 ZNF157P51786 506 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 FOXO4P98177 505 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 EXOSC9Q06265 439 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 MOB2Q70IA6 237 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 WDR63Q8IWG1 891 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 CCDC102AQ96A19 550 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 CSRNP1Q96S65 589 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 MCOLN1Q9GZU1 580 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 MRS2Q9HD23 443 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 LEMD3Q9Y2U8 911 aa14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 TNRC18O15417 2968 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-231ENST00000557336 ZNF804BA4D1E1 1349 aa14.28□□□□□ -0.12
HNRNPC-231ENST00000557336 MYH3P11055 1940 aa14.28□□□□□ -0.12
HNRNPC-231ENST00000557336 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms