RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 USP31Q70CQ4 1352 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
ATXN3-247ENST00000557311 USP4Q13107 963 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 HDGFL1Q5TGJ6 251 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 IP6K1Q92551 441 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
ATXN3-247ENST00000557311 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 SPINT1O43278 529 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-247ENST00000557311 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.86□□□□□ -1.31
ATXN3-247ENST00000557311 TSGA10IPQ3SY00 556 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 NME9Q86XW9 330 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 PLPP7Q8NBV4 271 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-247ENST00000557311 RAB6BQ9NRW1 208 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 COL18A1P39060 1754 aa6.86□□□□□ -1.31
ATXN3-247ENST00000557311 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-247ENST00000557311 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 A0A1W2PRU2 124 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-247ENST00000557311 ARHGEF10LQ9HCE6 1279 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-247ENST00000557311 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 PTSQ03393 145 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 KCNMA1Q12791 1236 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 COL13A1Q5TAT6 717 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-247ENST00000557311 PRICKLE2Q7Z3G6 844 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-247ENST00000557311 TMC1Q8TDI8 760 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 KLRG1Q96E93 195 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 CALR3Q96L12 384 aaKnown RBP6.84□□□□□ -1.31
ATXN3-247ENST00000557311 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
ATXN3-247ENST00000557311 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
ATXN3-247ENST00000557311 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 NFAT5O94916 1531 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 AMPHP49418 695 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 PRELPP51888 382 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 EML3Q32P44 896 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 KCTD17Q8N5Z5 321 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-247ENST00000557311 GLMNQ92990 594 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 ALG2Q9H553 416 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 TERF2IPQ9NYB0 399 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
ATXN3-247ENST00000557311 NSD2O96028 1365 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 A6NJR5 290 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 TGFB2P61812 414 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 FSTL1Q12841 308 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 RNFT1Q5M7Z0 435 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 PHTF2Q8N3S3 785 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
ATXN3-247ENST00000557311 GNRH1P01148 92 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 RHOQP17081 205 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 SSFA2P28290 1259 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 HOXC9P31274 260 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 SUZ12Q15022 739 aaKnown RBP6.81□□□□□ -1.32
ATXN3-247ENST00000557311 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 LYSMD3Q7Z3D4 306 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 C16orf71Q8IYS4 520 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-247ENST00000557311 RAPGEF4Q8WZA2 1011 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 COG3Q96JB2 828 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 NOD1Q9Y239 953 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
ATXN3-247ENST00000557311 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 TATP17735 454 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-247ENST00000557311 NCOA4Q13772 614 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
ATXN3-247ENST00000557311 RNF217Q8TC41 542 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 CNKSR1Q969H4 720 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
ATXN3-247ENST00000557311 COL25A1Q9BXS0 654 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-247ENST00000557311 ADAMTS8Q9UP79 889 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 BCS1LQ9Y276 419 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
ATXN3-247ENST00000557311 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 USP17L5A8MUK1 530 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 TRAK2O60296 914 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 HTRA3P83110 453 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms