RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 CCDC85CA6NKD9 419 aa13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 KIF23Q02241 960 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 CCDC27Q2M243 656 aa13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 GREM2Q9H772 168 aa13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 BSDC1Q9NW68 430 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 PITPNM2Q9BZ72 1349 aa13.78□□□□□ -0.2
HNRNPC-230ENST00000557201 MED23Q9ULK4 1368 aa13.77□□□□□ -0.2
HNRNPC-230ENST00000557201 USP17L3A6NCW0 530 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 USP17L4A6NCW7 530 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 NEURL1BA8MQ27 555 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 G3V3G9 751 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 H7C1W4 665 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 ZNF157P51786 506 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 G2E3Q7L622 706 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 USP17L1Q7RTZ2 530 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
HNRNPC-230ENST00000557201 CASP7P55210 303 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 DGKZQ13574 1117 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 RNF186Q9NXI6 227 aa13.76□□□□□ -0.21
HNRNPC-230ENST00000557201 CCT4P50991 539 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-230ENST00000557201 FKBP1BP68106 108 aa13.75□□□□□ -0.21
HNRNPC-230ENST00000557201 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
HNRNPC-230ENST00000557201 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
HNRNPC-230ENST00000557201 PAPPA2Q9BXP8 1791 aa13.75□□□□□ -0.21
HNRNPC-230ENST00000557201 MYH3P11055 1940 aa13.75□□□□□ -0.21
HNRNPC-230ENST00000557201 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-230ENST00000557201 MXD3Q9BW11 206 aa13.74□□□□□ -0.21
HNRNPC-230ENST00000557201 TRPA1O75762 1119 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 CSF1RP07333 972 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 NEXNQ0ZGT2 675 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 TWISTNBQ3B726 338 aaPredicted RBP13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 COA1Q9GZY4 146 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 IL16Q14005 1332 aa13.73□□□□□ -0.21
HNRNPC-230ENST00000557201 WNT10BO00744 389 aa13.72□□□□□ -0.21
HNRNPC-230ENST00000557201 GCKRQ14397 625 aa13.72□□□□□ -0.21
HNRNPC-230ENST00000557201 MOB2Q70IA6 237 aa13.72□□□□□ -0.21
HNRNPC-230ENST00000557201 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-230ENST00000557201 SCAF8Q9UPN6 1271 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-230ENST00000557201 SPEF2Q9C093 1822 aa13.72□□□□□ -0.21
HNRNPC-230ENST00000557201 ITGA6P23229 1130 aa13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 KLRK1P26718 216 aa13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 FLIIQ13045 1269 aa13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 ZBED3Q96IU2 234 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 IRS2Q9Y4H2 1338 aa13.71□□□□□ -0.21
HNRNPC-230ENST00000557201 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.22
HNRNPC-230ENST00000557201 MMP14P50281 582 aa13.71□□□□□ -0.22
HNRNPC-230ENST00000557201 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.22
HNRNPC-230ENST00000557201 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 VAMP4O75379 141 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 SLC34A2O95436 690 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 DNAAF4Q8WXU2 420 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 ANKRD2Q9GZV1 360 aa13.7□□□□□ -0.22
HNRNPC-230ENST00000557201 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
HNRNPC-230ENST00000557201 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
HNRNPC-230ENST00000557201 OGFOD1Q8N543 542 aa13.69□□□□□ -0.22
HNRNPC-230ENST00000557201 TM4SF4P48230 202 aa13.68□□□□□ -0.22
HNRNPC-230ENST00000557201 FOXO4P98177 505 aa13.68□□□□□ -0.22
HNRNPC-230ENST00000557201 CHRNDQ07001 517 aa13.68□□□□□ -0.22
HNRNPC-230ENST00000557201 C15orf52Q6ZUT6 534 aaKnown RBP13.68□□□□□ -0.22
HNRNPC-230ENST00000557201 MYH16Q9H6N6 1097 aa13.68□□□□□ -0.22
HNRNPC-230ENST00000557201 SNAP23O00161 211 aa13.67□□□□□ -0.22
HNRNPC-230ENST00000557201 SASH1O94885 1247 aa13.67□□□□□ -0.22
HNRNPC-230ENST00000557201 FKBP5Q13451 457 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-230ENST00000557201 CTU1Q7Z7A3 348 aaKnown RBP13.67□□□□□ -0.22
HNRNPC-230ENST00000557201 MPHOSPH8Q99549 860 aa13.67□□□□□ -0.22
HNRNPC-230ENST00000557201 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
HNRNPC-230ENST00000557201 TNRC18O15417 2968 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 GTF2IP78347 998 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 KIAA0825Q8IV33 1275 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 CERS5Q8N5B7 392 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
HNRNPC-230ENST00000557201 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
HNRNPC-230ENST00000557201 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
HNRNPC-230ENST00000557201 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms