RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-246ENST00000557030 ACPPP15309 386 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 CES1P23141 567 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 TXNRD3Q86VQ6 643 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 NCAPG2Q86XI2 1143 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 MAP4K3Q8IVH8 894 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 SNX29Q8TEQ0 813 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 MUC3BQ9H195 1237 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 FOXD3Q9UJU5 478 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-246ENST00000557030 GNEQ9Y223 722 aaKnown RBP7.82□□□□□ -1.16
ATXN3-246ENST00000557030 PPME1Q9Y570 386 aa7.82□□□□□ -1.16
ATXN3-246ENST00000557030 H3BRB1 525 aa7.81□□□□□ -1.16
ATXN3-246ENST00000557030 EREGO14944 169 aa7.81□□□□□ -1.16
ATXN3-246ENST00000557030 TMEM130Q8N3G9 435 aa7.81□□□□□ -1.16
ATXN3-246ENST00000557030 TUT1Q9H6E5 874 aaKnown RBP7.81□□□□□ -1.16
ATXN3-246ENST00000557030 AAMPQ13685 434 aa7.8□□□□□ -1.16
ATXN3-246ENST00000557030 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-246ENST00000557030 GLYCTKQ8IVS8 523 aa7.8□□□□□ -1.16
ATXN3-246ENST00000557030 GALNT11Q8NCW6 608 aa7.8□□□□□ -1.16
ATXN3-246ENST00000557030 HHIPQ96QV1 700 aa7.8□□□□□ -1.16
ATXN3-246ENST00000557030 FAM129BQ96TA1 746 aa7.8□□□□□ -1.16
ATXN3-246ENST00000557030 SHROOM4Q9ULL8 1493 aa7.8□□□□□ -1.16
ATXN3-246ENST00000557030 EPHA1P21709 976 aa7.79□□□□□ -1.16
ATXN3-246ENST00000557030 NOS3P29474 1203 aa7.79□□□□□ -1.16
ATXN3-246ENST00000557030 CDC27P30260 824 aa7.79□□□□□ -1.16
ATXN3-246ENST00000557030 TMEM102Q8N9M5 508 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-246ENST00000557030 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
ATXN3-246ENST00000557030 LACRTQ9GZZ8 138 aa7.79□□□□□ -1.16
ATXN3-246ENST00000557030 ZFYVE28Q9HCC9 887 aa7.79□□□□□ -1.16
ATXN3-246ENST00000557030 PHACTR2O75167 634 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 TRPA1O75762 1119 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 BRD1O95696 1058 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 Q6ZS46 218 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 TTC16Q8NEE8 873 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
ATXN3-246ENST00000557030 LINC01387J3KSC0 135 aa7.77□□□□□ -1.17
ATXN3-246ENST00000557030 PDE2AO00408 941 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 PTPRAP18433 802 aa7.77□□□□□ -1.17
ATXN3-246ENST00000557030 FOXD4L6Q3SYB3 417 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 FOXD4L3Q6VB84 417 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 DZIP1LQ8IYY4 767 aaKnown RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 CCER1Q8TC90 406 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 CITED4Q96RK1 184 aa7.77□□□□□ -1.17
ATXN3-246ENST00000557030 ZKSCAN3Q9BRR0 538 aa7.77□□□□□ -1.17
ATXN3-246ENST00000557030 MRPL18Q9H0U6 180 aaKnown RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 SH2B1Q9NRF2 756 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-246ENST00000557030 USP21Q9UK80 565 aa7.77□□□□□ -1.17
ATXN3-246ENST00000557030 SOWAHDA6NJG2 315 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-246ENST00000557030 FSCN2O14926 492 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 DYRK3O43781 588 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 H2AFB2P0C5Z0 115 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 EDN3P14138 238 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 DCAF11Q8TEB1 546 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 OSMRQ99650 979 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 BHLHE41Q9C0J9 482 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-246ENST00000557030 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 AMOTL2Q9Y2J4 779 aa7.76□□□□□ -1.17
ATXN3-246ENST00000557030 IREB2P48200 963 aaKnown RBP7.75□□□□□ -1.17
ATXN3-246ENST00000557030 TXNDC11Q6PKC3 985 aa7.75□□□□□ -1.17
ATXN3-246ENST00000557030 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.75□□□□□ -1.17
ATXN3-246ENST00000557030 GALNT12Q8IXK2 581 aa7.75□□□□□ -1.17
ATXN3-246ENST00000557030 WNT8BQ93098 351 aa7.75□□□□□ -1.17
ATXN3-246ENST00000557030 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
ATXN3-246ENST00000557030 KCNK4Q9NYG8 393 aa7.75□□□□□ -1.17
ATXN3-246ENST00000557030 H3BRJ5 948 aa7.74□□□□□ -1.17
ATXN3-246ENST00000557030 KLHL23Q8NBE8 558 aa7.74□□□□□ -1.17
ATXN3-246ENST00000557030 SEMA6BQ9H3T3 888 aa7.74□□□□□ -1.17
ATXN3-246ENST00000557030 AKTIPQ9H8T0 292 aa7.74□□□□□ -1.17
ATXN3-246ENST00000557030 GPR182O15218 404 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 NDUFB5O43674 189 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 ADAM11O75078 769 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 WISP1O95388 367 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 CD68P34810 354 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-246ENST00000557030 PIP4K2BP78356 416 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 VN1R5Q7Z5H4 357 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 KLHDC7BQ96G42 594 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 RBCK1Q9BYM8 510 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 OSGEPQ9NPF4 335 aa7.73□□□□□ -1.17
ATXN3-246ENST00000557030 ALX3O95076 343 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 PDE3BQ13370 1112 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 USPL1Q5W0Q7 1092 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 FOXD4L4Q8WXT5 416 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-246ENST00000557030 BSNDQ8WZ55 320 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 ALKBH8Q96BT7 664 aaKnown RBP7.72□□□□□ -1.17
ATXN3-246ENST00000557030 CARD10Q9BWT7 1032 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 DCAF1Q9Y4B6 1507 aa7.72□□□□□ -1.17
ATXN3-246ENST00000557030 A0A1W2PP55 124 aa7.71□□□□□ -1.18
ATXN3-246ENST00000557030 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-246ENST00000557030 HGSNATQ68CP4 663 aa7.71□□□□□ -1.18
ATXN3-246ENST00000557030 CCNJLQ8IV13 435 aa7.71□□□□□ -1.18
ATXN3-246ENST00000557030 TP53INP1Q96A56 240 aa7.71□□□□□ -1.18
ATXN3-246ENST00000557030 TCF12Q99081 682 aa7.71□□□□□ -1.18
ATXN3-246ENST00000557030 SEC31BQ9NQW1 1179 aa7.71□□□□□ -1.18
ATXN3-246ENST00000557030 SOX1O00570 391 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-246ENST00000557030 CDC25BP30305 580 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms