RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 NFKBIEO00221 500 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 TM4SF5O14894 197 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 H2AFB1P0C5Y9 115 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 H2AFB2P0C5Z0 115 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 EPHA1P21709 976 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
LINC00648-203ENST00000556923 TNFRSF21O75509 655 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 ALX3O95076 343 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 CDC25BP30305 580 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 SERPINB4P48594 390 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 B4GALNT3Q6L9W6 998 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 TMEM130Q8N3G9 435 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 ADAM19Q9H013 955 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 DZANK1Q9NVP4 752 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 FOXD3Q9UJU5 478 aaPredicted RBP9.01□□□□□ -0.97
LINC00648-203ENST00000556923 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
LINC00648-203ENST00000556923 F8W735 103 aaPredicted RBP9□□□□□ -0.97
LINC00648-203ENST00000556923 EREGO14944 169 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 TRPA1O75762 1119 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 PTPRAP18433 802 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 USP5P45974 858 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 PRSS36Q5K4E3 855 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 GJD3Q8N144 294 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 RETREG2Q8NC44 543 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 PMEPA1Q969W9 287 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 HHIPQ96QV1 700 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 CARD10Q9BWT7 1032 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 EGFL7Q9UHF1 273 aa9□□□□□ -0.97
LINC00648-203ENST00000556923 ICMTO60725 284 aa8.99□□□□□ -0.97
LINC00648-203ENST00000556923 PHACTR2O75167 634 aa8.99□□□□□ -0.97
LINC00648-203ENST00000556923 EHHADHQ08426 723 aa8.99□□□□□ -0.97
LINC00648-203ENST00000556923 FOXD4L6Q3SYB3 417 aaPredicted RBP8.99□□□□□ -0.97
LINC00648-203ENST00000556923 FOXD4L3Q6VB84 417 aaPredicted RBP8.99□□□□□ -0.97
LINC00648-203ENST00000556923 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
LINC00648-203ENST00000556923 SNX29Q8TEQ0 813 aa8.99□□□□□ -0.97
LINC00648-203ENST00000556923 KCNK4Q9NYG8 393 aa8.99□□□□□ -0.97
LINC00648-203ENST00000556923 H3BRB1 525 aa8.98□□□□□ -0.97
LINC00648-203ENST00000556923 PDE2AO00408 941 aaPredicted RBP8.98□□□□□ -0.97
LINC00648-203ENST00000556923 FSCN2O14926 492 aa8.98□□□□□ -0.97
LINC00648-203ENST00000556923 WISP1O95388 367 aa8.98□□□□□ -0.97
LINC00648-203ENST00000556923 CD68P34810 354 aaPredicted RBP8.98□□□□□ -0.97
LINC00648-203ENST00000556923 ECM1Q16610 540 aa8.98□□□□□ -0.97
LINC00648-203ENST00000556923 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.98□□□□□ -0.97
LINC00648-203ENST00000556923 DZIP1LQ8IYY4 767 aaKnown RBP8.98□□□□□ -0.97
LINC00648-203ENST00000556923 Q8N3U1 123 aa8.98□□□□□ -0.97
LINC00648-203ENST00000556923 TUT1Q9H6E5 874 aaKnown RBP8.98□□□□□ -0.97
LINC00648-203ENST00000556923 ZMYM1Q5SVZ6 1142 aa8.97□□□□□ -0.97
LINC00648-203ENST00000556923 Q6ZS46 218 aa8.97□□□□□ -0.97
LINC00648-203ENST00000556923 ZKSCAN3Q9BRR0 538 aa8.97□□□□□ -0.97
LINC00648-203ENST00000556923 H3BRJ5 948 aa8.96□□□□□ -0.98
LINC00648-203ENST00000556923 XP32Q5T750 250 aa8.96□□□□□ -0.98
LINC00648-203ENST00000556923 FAM117BQ6P1L5 589 aa8.96□□□□□ -0.98
LINC00648-203ENST00000556923 OSMRQ99650 979 aa8.96□□□□□ -0.98
LINC00648-203ENST00000556923 FAM177BA6PVY3 158 aa8.95□□□□□ -0.98
LINC00648-203ENST00000556923 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
LINC00648-203ENST00000556923 TMEM102Q8N9M5 508 aaPredicted RBP8.95□□□□□ -0.98
LINC00648-203ENST00000556923 KLHL23Q8NBE8 558 aa8.95□□□□□ -0.98
LINC00648-203ENST00000556923 SOX13Q9UN79 622 aa8.95□□□□□ -0.98
LINC00648-203ENST00000556923 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
LINC00648-203ENST00000556923 ADAM11O75078 769 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 EDN3P14138 238 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 ARHGAP4P98171 946 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 ACAD11Q709F0 780 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
LINC00648-203ENST00000556923 NXPE3Q969Y0 559 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 KLHDC7BQ96G42 594 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 SEC31BQ9NQW1 1179 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 LATS2Q9NRM7 1088 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
LINC00648-203ENST00000556923 GLB1P16278 677 aa8.93□□□□□ -0.98
LINC00648-203ENST00000556923 CABP4P57796 275 aa8.93□□□□□ -0.98
LINC00648-203ENST00000556923 PEAR1Q5VY43 1037 aaPredicted RBP8.93□□□□□ -0.98
LINC00648-203ENST00000556923 PRR23CQ6ZRP0 262 aa8.93□□□□□ -0.98
LINC00648-203ENST00000556923 ZFYVE28Q9HCC9 887 aa8.93□□□□□ -0.98
LINC00648-203ENST00000556923 PIP4K2BP78356 416 aa8.92□□□□□ -0.98
LINC00648-203ENST00000556923 KIAA1211Q6ZU35 1233 aa8.92□□□□□ -0.98
LINC00648-203ENST00000556923 UBASH3BQ8TF42 649 aa8.92□□□□□ -0.98
LINC00648-203ENST00000556923 WNT8BQ93098 351 aa8.92□□□□□ -0.98
LINC00648-203ENST00000556923 BRPF3Q9ULD4 1205 aa8.92□□□□□ -0.98
LINC00648-203ENST00000556923 POLR3DP05423 398 aaPredicted RBP8.91□□□□□ -0.98
LINC00648-203ENST00000556923 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
LINC00648-203ENST00000556923 HGSNATQ68CP4 663 aa8.91□□□□□ -0.98
LINC00648-203ENST00000556923 UBL7Q96S82 380 aaPredicted RBP8.91□□□□□ -0.98
LINC00648-203ENST00000556923 OSGEPQ9NPF4 335 aa8.91□□□□□ -0.98
LINC00648-203ENST00000556923 VN1R5Q7Z5H4 357 aa8.9□□□□□ -0.98
LINC00648-203ENST00000556923 SLC7A3Q8WY07 619 aa8.9□□□□□ -0.98
LINC00648-203ENST00000556923 BSNDQ8WZ55 320 aa8.9□□□□□ -0.98
LINC00648-203ENST00000556923 BHLHE41Q9C0J9 482 aaPredicted RBP8.9□□□□□ -0.98
LINC00648-203ENST00000556923 NLRP12P59046 1061 aa8.89□□□□□ -0.99
LINC00648-203ENST00000556923 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
LINC00648-203ENST00000556923 NDUFB5O43674 189 aa8.88□□□□□ -0.99
LINC00648-203ENST00000556923 PDE4CQ08493 712 aa8.88□□□□□ -0.99
LINC00648-203ENST00000556923 GALNT12Q8IXK2 581 aa8.88□□□□□ -0.99
LINC00648-203ENST00000556923 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 METTL12A8MUP2 240 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 SOX1O00570 391 aaPredicted RBP8.87□□□□□ -0.99
LINC00648-203ENST00000556923 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms