RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RPS12P25398 132 aaKnown RBP28.58■■■□□ 2.17
TDP1-216ENST00000556867 LRRC24Q50LG9 513 aa28.58■■■□□ 2.17
TDP1-216ENST00000556867 EAPPQ56P03 285 aaPredicted RBP28.58■■■□□ 2.17
TDP1-216ENST00000556867 KLHDC4Q8TBB5 520 aa28.58■■■□□ 2.17
TDP1-216ENST00000556867 DPF2Q92785 391 aa28.58■■■□□ 2.17
TDP1-216ENST00000556867 PLIN1O60240 522 aa28.57■■■□□ 2.16
TDP1-216ENST00000556867 RLBP1P12271 317 aa28.57■■■□□ 2.16
TDP1-216ENST00000556867 PTPN12Q05209 780 aaKnown RBP28.57■■■□□ 2.16
TDP1-216ENST00000556867 ADARB2Q9NS39 739 aaKnown RBP28.57■■■□□ 2.16
TDP1-216ENST00000556867 ZBTB12Q9Y330 459 aaPredicted RBP28.57■■■□□ 2.16
TDP1-216ENST00000556867 UBE4AQ14139 1066 aa28.56■■■□□ 2.16
TDP1-216ENST00000556867 USP50Q70EL3 339 aaPredicted RBP28.56■■■□□ 2.16
TDP1-216ENST00000556867 USP17L3A6NCW0 530 aa28.55■■■□□ 2.16
TDP1-216ENST00000556867 USP17L4A6NCW7 530 aa28.55■■■□□ 2.16
TDP1-216ENST00000556867 MTX1Q13505 466 aa28.55■■■□□ 2.16
TDP1-216ENST00000556867 USP17L1Q7RTZ2 530 aa28.55■■■□□ 2.16
TDP1-216ENST00000556867 EYA2O00167 538 aa28.54■■■□□ 2.16
TDP1-216ENST00000556867 GNAI2P04899 355 aa28.54■■■□□ 2.16
TDP1-216ENST00000556867 METTL24Q5JXM2 366 aa28.54■■■□□ 2.16
TDP1-216ENST00000556867 VGLL2Q8N8G2 317 aa28.54■■■□□ 2.16
TDP1-216ENST00000556867 CNOT7Q9UIV1 285 aaKnown RBP28.54■■■□□ 2.16
TDP1-216ENST00000556867 FBXO3Q9UK99 471 aa28.54■■■□□ 2.16
TDP1-216ENST00000556867 RSBN1LQ6PCB5 846 aaPredicted RBP28.53■■■□□ 2.16
TDP1-216ENST00000556867 ITPRIPQ8IWB1 547 aa28.53■■■□□ 2.16
TDP1-216ENST00000556867 MICALL2Q8IY33 904 aa28.53■■■□□ 2.16
TDP1-216ENST00000556867 ZNF804AQ7Z570 1209 aa28.52■■■□□ 2.16
TDP1-216ENST00000556867 AGBL3Q8NEM8 1001 aa28.52■■■□□ 2.16
TDP1-216ENST00000556867 CD209Q9NNX6 404 aa28.52■■■□□ 2.16
TDP1-216ENST00000556867 CLEC11AQ9Y240 323 aa28.52■■■□□ 2.16
TDP1-216ENST00000556867 SHTN1A0MZ66 631 aa28.51■■■□□ 2.15
TDP1-216ENST00000556867 H7C1D1 291 aa28.51■■■□□ 2.15
TDP1-216ENST00000556867 CIAO1O76071 339 aa28.51■■■□□ 2.15
TDP1-216ENST00000556867 PDE8BO95263 885 aa28.51■■■□□ 2.15
TDP1-216ENST00000556867 MS4A1P11836 297 aa28.51■■■□□ 2.15
TDP1-216ENST00000556867 STRIP1Q5VSL9 837 aa28.51■■■□□ 2.15
TDP1-216ENST00000556867 DACT2Q5SW24 774 aa28.5■■■□□ 2.15
TDP1-216ENST00000556867 ATG9AQ7Z3C6 839 aa28.5■■■□□ 2.15
TDP1-216ENST00000556867 GMLQ99445 158 aa28.5■■■□□ 2.15
TDP1-216ENST00000556867 COPRSQ9NQ92 184 aa28.5■■■□□ 2.15
TDP1-216ENST00000556867 SRGAP3O43295 1099 aa28.49■■■□□ 2.15
TDP1-216ENST00000556867 APLP1P51693 650 aa28.49■■■□□ 2.15
TDP1-216ENST00000556867 PANK1Q8TE04 598 aa28.49■■■□□ 2.15
TDP1-216ENST00000556867 ZBTB7BO15156 539 aaPredicted RBP28.48■■■□□ 2.15
TDP1-216ENST00000556867 IL1R1P14778 569 aa28.48■■■□□ 2.15
TDP1-216ENST00000556867 TRPM4Q8TD43 1214 aa28.48■■■□□ 2.15
TDP1-216ENST00000556867 SIL1Q9H173 461 aa28.48■■■□□ 2.15
TDP1-216ENST00000556867 YTHDC1Q96MU7 727 aaKnown RBP28.47■■■□□ 2.15
TDP1-216ENST00000556867 PA2G4Q9UQ80 394 aaKnown RBP28.47■■■□□ 2.15
TDP1-216ENST00000556867 MYO3BQ8WXR4 1341 aa28.46■■■□□ 2.15
TDP1-216ENST00000556867 HIRAP54198 1017 aaPredicted RBP28.46■■■□□ 2.15
TDP1-216ENST00000556867 PUM3Q15397 648 aaKnown RBP28.46■■■□□ 2.15
TDP1-216ENST00000556867 MAP1SQ66K74 1059 aaPredicted RBP28.46■■■□□ 2.15
TDP1-216ENST00000556867 TTLL5Q6EMB2 1281 aa28.46■■■□□ 2.15
TDP1-216ENST00000556867 PASKQ96RG2 1323 aa28.45■■■□□ 2.15
TDP1-216ENST00000556867 ITGBL1O95965 494 aaPredicted RBP28.45■■■□□ 2.14
TDP1-216ENST00000556867 FGFR2P21802 821 aa28.45■■■□□ 2.14
TDP1-216ENST00000556867 ZNF280AP59817 542 aaPredicted RBP28.45■■■□□ 2.14
TDP1-216ENST00000556867 CNTROBQ8N137 903 aa28.45■■■□□ 2.14
TDP1-216ENST00000556867 FBXW7Q969H0 707 aa28.45■■■□□ 2.14
TDP1-216ENST00000556867 FAM84BQ96KN1 310 aaPredicted RBP28.45■■■□□ 2.14
TDP1-216ENST00000556867 CEP350Q5VT06 3117 aa28.45■■■□□ 2.14
TDP1-216ENST00000556867 HIBADHP31937 336 aaKnown RBP28.44■■■□□ 2.14
TDP1-216ENST00000556867 IL15P40933 162 aaPredicted RBP28.44■■■□□ 2.14
TDP1-216ENST00000556867 GYG1P46976 350 aa28.44■■■□□ 2.14
TDP1-216ENST00000556867 GTF2IP78347 998 aa28.44■■■□□ 2.14
TDP1-216ENST00000556867 SAMD7Q7Z3H4 446 aa28.44■■■□□ 2.14
TDP1-216ENST00000556867 ZC3H15Q8WU90 426 aaKnown RBP28.44■■■□□ 2.14
TDP1-216ENST00000556867 PGAP2Q9UHJ9 254 aa28.44■■■□□ 2.14
TDP1-216ENST00000556867 PNMA6EA0A0J9YXQ4 647 aa28.43■■■□□ 2.14
TDP1-216ENST00000556867 USP17L8P0C7I0 530 aa28.43■■■□□ 2.14
TDP1-216ENST00000556867 TBC1D10BQ4KMP7 808 aaPredicted RBP28.43■■■□□ 2.14
TDP1-216ENST00000556867 MXD3Q9BW11 206 aa28.43■■■□□ 2.14
TDP1-216ENST00000556867 EGFRP00533 1210 aa28.42■■■□□ 2.14
TDP1-216ENST00000556867 FBXO33Q7Z6M2 555 aa28.42■■■□□ 2.14
TDP1-216ENST00000556867 TDRD7Q8NHU6 1098 aaKnown RBP28.42■■■□□ 2.14
TDP1-216ENST00000556867 CEP126Q9P2H0 1117 aa28.42■■■□□ 2.14
TDP1-216ENST00000556867 IFIT1P09914 478 aaKnown RBP28.41■■■□□ 2.14
TDP1-216ENST00000556867 MVPQ14764 893 aaKnown RBP28.41■■■□□ 2.14
TDP1-216ENST00000556867 KIF4BQ2VIQ3 1234 aa28.41■■■□□ 2.14
TDP1-216ENST00000556867 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.41■■■□□ 2.14
TDP1-216ENST00000556867 LPIN2Q92539 896 aa28.41■■■□□ 2.14
TDP1-216ENST00000556867 C1orf115Q9H7X2 142 aa28.41■■■□□ 2.14
TDP1-216ENST00000556867 SASH1O94885 1247 aa28.4■■■□□ 2.14
TDP1-216ENST00000556867 SLC5A1P13866 664 aa28.4■■■□□ 2.14
TDP1-216ENST00000556867 CAVIN4Q5BKX8 364 aa28.4■■■□□ 2.14
TDP1-216ENST00000556867 FAM205AQ6ZU69 1335 aa28.4■■■□□ 2.14
TDP1-216ENST00000556867 MMP14P50281 582 aa28.39■■■□□ 2.14
TDP1-216ENST00000556867 FKBP1AP62942 108 aaKnown RBP28.39■■■□□ 2.14
TDP1-216ENST00000556867 ATP8B2P98198 1209 aa28.39■■■□□ 2.14
TDP1-216ENST00000556867 POLA2Q14181 598 aa28.39■■■□□ 2.14
TDP1-216ENST00000556867 ARAP2Q8WZ64 1704 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 PDE3AQ14432 1141 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 ATP2B3Q16720 1220 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 RBM26Q5T8P6 1007 aaKnown RBP28.38■■■□□ 2.13
TDP1-216ENST00000556867 VPS37DQ86XT2 251 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 CERS5Q8N5B7 392 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 SSH3Q8TE77 659 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 MYOZ2Q9NPC6 264 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 DDX19BQ9UMR2 479 aa28.38■■■□□ 2.13
TDP1-216ENST00000556867 OGFOD1Q8N543 542 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms