RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 MYO3BQ8WXR4 1341 aa13.6□□□□□ -0.23
XRCC3-216ENST00000556682 WTIPA6NIX2 430 aaPredicted RBP13.59□□□□□ -0.23
XRCC3-216ENST00000556682 CELF2O95319 508 aaKnown RBP13.59□□□□□ -0.23
XRCC3-216ENST00000556682 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
XRCC3-216ENST00000556682 ECE1P42892 770 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 VEGFBP49765 207 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 OGFOD1Q8N543 542 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 UTYO14607 1347 aa13.59□□□□□ -0.23
XRCC3-216ENST00000556682 TAF5LO75529 589 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 HSPA1AP0DMV8 641 aaKnown RBP13.58□□□□□ -0.24
XRCC3-216ENST00000556682 HSPA1BP0DMV9 641 aaKnown RBP13.58□□□□□ -0.24
XRCC3-216ENST00000556682 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
XRCC3-216ENST00000556682 CST9Q5W186 159 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
XRCC3-216ENST00000556682 KRT26Q7Z3Y9 468 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 USP48Q86UV5 1035 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 SULF1Q8IWU6 871 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 MYH3P11055 1940 aa13.58□□□□□ -0.24
XRCC3-216ENST00000556682 ZNF609O15014 1411 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
XRCC3-216ENST00000556682 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
XRCC3-216ENST00000556682 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 TXNRD3Q86VQ6 643 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-216ENST00000556682 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-216ENST00000556682 GMLQ99445 158 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 API5Q9BZZ5 524 aaKnown RBP13.57□□□□□ -0.24
XRCC3-216ENST00000556682 ZNF408Q9H9D4 720 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
XRCC3-216ENST00000556682 WDR33Q9C0J8 1336 aaKnown RBP13.57□□□□□ -0.24
XRCC3-216ENST00000556682 PLIN1O60240 522 aa13.56□□□□□ -0.24
XRCC3-216ENST00000556682 EGFRP00533 1210 aa13.56□□□□□ -0.24
XRCC3-216ENST00000556682 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
XRCC3-216ENST00000556682 SCARF1Q14162 830 aa13.56□□□□□ -0.24
XRCC3-216ENST00000556682 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
XRCC3-216ENST00000556682 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
XRCC3-216ENST00000556682 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
XRCC3-216ENST00000556682 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
XRCC3-216ENST00000556682 HDAC9Q9UKV0 1011 aa13.56□□□□□ -0.24
XRCC3-216ENST00000556682 GTF2IP78347 998 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
XRCC3-216ENST00000556682 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 MIER1Q8N108 512 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 KAZALD1Q96I82 304 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 CAPNS2Q96L46 248 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 USP44Q9H0E7 712 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 GGA3Q9NZ52 723 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
XRCC3-216ENST00000556682 MROH5Q6ZUA9 1318 aa13.55□□□□□ -0.24
XRCC3-216ENST00000556682 KLRK1P26718 216 aa13.54□□□□□ -0.24
XRCC3-216ENST00000556682 GRM1Q13255 1194 aa13.54□□□□□ -0.24
XRCC3-216ENST00000556682 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
XRCC3-216ENST00000556682 C2orf69Q8N8R5 385 aa13.54□□□□□ -0.24
XRCC3-216ENST00000556682 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
XRCC3-216ENST00000556682 SNAP23O00161 211 aa13.53□□□□□ -0.24
XRCC3-216ENST00000556682 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
XRCC3-216ENST00000556682 IL1R1P14778 569 aa13.53□□□□□ -0.24
XRCC3-216ENST00000556682 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
XRCC3-216ENST00000556682 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
XRCC3-216ENST00000556682 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
XRCC3-216ENST00000556682 KIF16BQ96L93 1317 aa13.53□□□□□ -0.24
XRCC3-216ENST00000556682 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
XRCC3-216ENST00000556682 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
XRCC3-216ENST00000556682 MAP2K2P36507 400 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 CTCFP49711 727 aaPredicted RBP13.52□□□□□ -0.25
XRCC3-216ENST00000556682 HUNKP57058 714 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 METTL24Q5JXM2 366 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 CYP4F22Q6NT55 531 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 KIAA0825Q8IV33 1275 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 MXD3Q9BW11 206 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 RIPOR2Q9Y4F9 1068 aa13.52□□□□□ -0.25
XRCC3-216ENST00000556682 SCN9AQ15858 1988 aa13.51□□□□□ -0.25
XRCC3-216ENST00000556682 SASH1O94885 1247 aa13.51□□□□□ -0.25
XRCC3-216ENST00000556682 HIBADHP31937 336 aaKnown RBP13.51□□□□□ -0.25
XRCC3-216ENST00000556682 FKBP1AP62942 108 aaKnown RBP13.51□□□□□ -0.25
XRCC3-216ENST00000556682 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
XRCC3-216ENST00000556682 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
XRCC3-216ENST00000556682 WBP1LQ9NX94 342 aa13.51□□□□□ -0.25
XRCC3-216ENST00000556682 ASTN2O75129 1339 aaPredicted RBP13.5□□□□□ -0.25
XRCC3-216ENST00000556682 IRS2Q9Y4H2 1338 aa13.5□□□□□ -0.25
XRCC3-216ENST00000556682 WNT10BO00744 389 aa13.5□□□□□ -0.25
XRCC3-216ENST00000556682 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
XRCC3-216ENST00000556682 CAVIN4Q5BKX8 364 aa13.5□□□□□ -0.25
XRCC3-216ENST00000556682 COL13A1Q5TAT6 717 aaPredicted RBP13.5□□□□□ -0.25
XRCC3-216ENST00000556682 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 ZBTB22O15209 634 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms