RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 DNAJB12Q9NXW2 375 aaKnown RBP6.87□□□□□ -1.31
CDKN3-210ENST00000556305 ALAS2P22557 587 aa6.86□□□□□ -1.31
CDKN3-210ENST00000556305 ST13P50502 369 aaKnown RBP6.86□□□□□ -1.31
CDKN3-210ENST00000556305 PCBP4P57723 403 aaKnown RBP6.86□□□□□ -1.31
CDKN3-210ENST00000556305 TAF1CQ15572 869 aaPredicted RBP6.86□□□□□ -1.31
CDKN3-210ENST00000556305 RNFT1Q5M7Z0 435 aa6.86□□□□□ -1.31
CDKN3-210ENST00000556305 DTHD1Q6ZMT9 781 aa6.86□□□□□ -1.31
CDKN3-210ENST00000556305 WHAMMQ8TF30 809 aa6.86□□□□□ -1.31
CDKN3-210ENST00000556305 GDF2Q9UK05 429 aaPredicted RBP6.86□□□□□ -1.31
CDKN3-210ENST00000556305 PPM1HQ9ULR3 514 aa6.86□□□□□ -1.31
CDKN3-210ENST00000556305 TTF2Q9UNY4 1162 aaKnown RBP6.86□□□□□ -1.31
CDKN3-210ENST00000556305 ERCC5P28715 1186 aaPredicted RBP6.85□□□□□ -1.31
CDKN3-210ENST00000556305 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
CDKN3-210ENST00000556305 PEAR1Q5VY43 1037 aaPredicted RBP6.85□□□□□ -1.31
CDKN3-210ENST00000556305 HS2ST1Q7LGA3 356 aa6.85□□□□□ -1.31
CDKN3-210ENST00000556305 GOLGA6L1Q8N7Z2 621 aa6.85□□□□□ -1.31
CDKN3-210ENST00000556305 PSMG3-AS1Q96PY0 264 aa6.85□□□□□ -1.31
CDKN3-210ENST00000556305 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
CDKN3-210ENST00000556305 OXCT2Q9BYC2 517 aaPredicted RBP6.85□□□□□ -1.31
CDKN3-210ENST00000556305 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
CDKN3-210ENST00000556305 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
CDKN3-210ENST00000556305 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
CDKN3-210ENST00000556305 ADH7P40394 386 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 FCGRTP55899 365 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 CCNJLQ8IV13 435 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 CEP120Q8N960 986 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 TMEM102Q8N9M5 508 aaPredicted RBP6.84□□□□□ -1.31
CDKN3-210ENST00000556305 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
CDKN3-210ENST00000556305 PBX4Q9BYU1 374 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 HCN2Q9UL51 889 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 SLC6A14Q9UN76 642 aa6.84□□□□□ -1.31
CDKN3-210ENST00000556305 USP31Q70CQ4 1352 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 ADARB2-AS1A8MUL3 147 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 ITGB2P05107 769 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 CPB1P15086 417 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 ZC3H6P61129 1189 aaKnown RBP6.83□□□□□ -1.32
CDKN3-210ENST00000556305 HDLBPQ00341 1268 aaKnown RBP6.83□□□□□ -1.32
CDKN3-210ENST00000556305 FANCCQ00597 558 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 PTPN12Q05209 780 aaKnown RBP6.83□□□□□ -1.32
CDKN3-210ENST00000556305 GAS6Q14393 721 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 COL13A1Q5TAT6 717 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-210ENST00000556305 ELMSAN1Q6PJG2 1045 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 HFE2Q6ZVN8 426 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 CACTIN-AS1Q8N1I8 211 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 CEP44Q9C0F1 390 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 BHLHE41Q9C0J9 482 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-210ENST00000556305 AKAP2Q9Y2D5 859 aa6.83□□□□□ -1.32
CDKN3-210ENST00000556305 ELOA3CA0A087WX78 387 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-210ENST00000556305 ELOA3DA6NLF2 546 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-210ENST00000556305 NEURL1BA8MQ27 555 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 J3QW42 95 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 C2CD2LO14523 706 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 CTSHP09668 335 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 RLBP1P12271 317 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 PWP1Q13610 501 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 PLA2G4EQ3MJ16 856 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 ELOA3BQ3SY89 546 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 CEP135Q66GS9 1140 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 NT5DC4Q86YG4 428 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 GLIS3Q8NEA6 775 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 ELOA3Q8NG57 546 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 TCF12Q99081 682 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 CCSER2Q9H7U1 834 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 ABCB6Q9NP58 842 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 FRRS1LQ9P0K9 344 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 IGF1RP08069 1367 aa6.82□□□□□ -1.32
CDKN3-210ENST00000556305 ZBTB42B2RXF5 422 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 MSTNO14793 375 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 PTPRAP18433 802 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 SRSF11Q05519 484 aaKnown RBP6.81□□□□□ -1.32
CDKN3-210ENST00000556305 GNL2Q13823 731 aaKnown RBP6.81□□□□□ -1.32
CDKN3-210ENST00000556305 SLCO4C1Q6ZQN7 724 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 PLD4Q96BZ4 506 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 SPOCK3Q9BQ16 436 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 NOC4LQ9BVI4 516 aaKnown RBP6.81□□□□□ -1.32
CDKN3-210ENST00000556305 TGIF2Q9GZN2 237 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 RASSF4Q9H2L5 321 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 GGT7Q9UJ14 662 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 GGA1Q9UJY5 639 aa6.81□□□□□ -1.32
CDKN3-210ENST00000556305 A0A096LPE4 126 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-210ENST00000556305 PROCP04070 461 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 ITPKAP23677 461 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 CABP4P57796 275 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 ATP11AP98196 1134 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 CCDC85BQ15834 202 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-210ENST00000556305 RPS26P11Q5JNZ5 115 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-210ENST00000556305 MEI1Q5TIA1 1274 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 DIEXFQ68CQ4 756 aaKnown RBP6.8□□□□□ -1.32
CDKN3-210ENST00000556305 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
CDKN3-210ENST00000556305 BSNDQ8WZ55 320 aa6.8□□□□□ -1.32
CDKN3-210ENST00000556305 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms