RNA–Protein interactions for RNA: ENST00000556138.1

LINC01550-205, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 4

Gene LINC01550, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-205ENST00000556138 TPSG1Q9NRR2 321 aa7.01□□□□□ -1.29
LINC01550-205ENST00000556138 BRPF3Q9ULD4 1205 aa7.01□□□□□ -1.29
LINC01550-205ENST00000556138 C9orf172C9J069 976 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 IGHA2P01877 340 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 CDC27P30260 824 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 EHHADHQ08426 723 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 PDE4CQ08493 712 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 PEAR1Q5VY43 1037 aaPredicted RBP7□□□□□ -1.29
LINC01550-205ENST00000556138 GALNT11Q8NCW6 608 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 ZKSCAN3Q9BRR0 538 aa7□□□□□ -1.29
LINC01550-205ENST00000556138 SOWAHDA6NJG2 315 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 ADAM23O75077 832 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 BRD1O95696 1058 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 ITGB7P26010 798 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 USPL1Q5W0Q7 1092 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 CCER1Q8TC90 406 aaPredicted RBP6.99□□□□□ -1.29
LINC01550-205ENST00000556138 FAM129BQ96TA1 746 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 CARD10Q9BWT7 1032 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 ZFYVE28Q9HCC9 887 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 KCNK4Q9NYG8 393 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 USP21Q9UK80 565 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 GNEQ9Y223 722 aaKnown RBP6.99□□□□□ -1.29
LINC01550-205ENST00000556138 PPME1Q9Y570 386 aa6.99□□□□□ -1.29
LINC01550-205ENST00000556138 ORC1Q13415 861 aa6.98□□□□□ -1.29
LINC01550-205ENST00000556138 RSPO4Q2I0M5 234 aaPredicted RBP6.98□□□□□ -1.29
LINC01550-205ENST00000556138 TXNRD3Q86VQ6 643 aa6.98□□□□□ -1.29
LINC01550-205ENST00000556138 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
LINC01550-205ENST00000556138 OSMRQ99650 979 aa6.98□□□□□ -1.29
LINC01550-205ENST00000556138 ADAM19Q9H013 955 aa6.98□□□□□ -1.29
LINC01550-205ENST00000556138 K7ELQ4 463 aaPredicted RBP6.97□□□□□ -1.29
LINC01550-205ENST00000556138 PDE2AO00408 941 aaPredicted RBP6.97□□□□□ -1.29
LINC01550-205ENST00000556138 GPR182O15218 404 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 NDUFB5O43674 189 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 ALX3O95076 343 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 PTPRAP18433 802 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 NOS3P29474 1203 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 IREB2P48200 963 aaKnown RBP6.97□□□□□ -1.29
LINC01550-205ENST00000556138 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
LINC01550-205ENST00000556138 FOXD4L6Q3SYB3 417 aaPredicted RBP6.97□□□□□ -1.29
LINC01550-205ENST00000556138 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 HGSNATQ68CP4 663 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 IGF2-ASQ6U949 168 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 FOXD4L3Q6VB84 417 aaPredicted RBP6.97□□□□□ -1.29
LINC01550-205ENST00000556138 WFDC12Q8WWY7 111 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 AMOTL2Q9Y2J4 779 aa6.97□□□□□ -1.29
LINC01550-205ENST00000556138 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
LINC01550-205ENST00000556138 WISP1O95388 367 aa6.96□□□□□ -1.3
LINC01550-205ENST00000556138 CACTIN-AS1Q8N1I8 211 aa6.96□□□□□ -1.3
LINC01550-205ENST00000556138 TMEM102Q8N9M5 508 aaPredicted RBP6.96□□□□□ -1.3
LINC01550-205ENST00000556138 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
LINC01550-205ENST00000556138 MUC3BQ9H195 1237 aa6.96□□□□□ -1.3
LINC01550-205ENST00000556138 SOX13Q9UN79 622 aa6.96□□□□□ -1.3
LINC01550-205ENST00000556138 METTL12A8MUP2 240 aa6.95□□□□□ -1.3
LINC01550-205ENST00000556138 FSCN2O14926 492 aa6.95□□□□□ -1.3
LINC01550-205ENST00000556138 ADAM11O75078 769 aa6.95□□□□□ -1.3
LINC01550-205ENST00000556138 EDN3P14138 238 aa6.95□□□□□ -1.3
LINC01550-205ENST00000556138 AGGF1Q8N302 714 aaeCLIP6.95□□□□□ -1.3
LINC01550-205ENST00000556138 KLHDC7BQ96G42 594 aa6.95□□□□□ -1.3
LINC01550-205ENST00000556138 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
LINC01550-205ENST00000556138 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
LINC01550-205ENST00000556138 VN1R5Q7Z5H4 357 aa6.94□□□□□ -1.3
LINC01550-205ENST00000556138 MAP4K3Q8IVH8 894 aa6.94□□□□□ -1.3
LINC01550-205ENST00000556138 FOXD4L4Q8WXT5 416 aaPredicted RBP6.94□□□□□ -1.3
LINC01550-205ENST00000556138 SEMA6BQ9H3T3 888 aa6.94□□□□□ -1.3
LINC01550-205ENST00000556138 IVNS1ABPQ9Y6Y0 642 aa6.94□□□□□ -1.3
LINC01550-205ENST00000556138 A0A1W2PP55 124 aa6.93□□□□□ -1.3
LINC01550-205ENST00000556138 F8W735 103 aaPredicted RBP6.93□□□□□ -1.3
LINC01550-205ENST00000556138 H3BRJ5 948 aa6.93□□□□□ -1.3
LINC01550-205ENST00000556138 CD68P34810 354 aaPredicted RBP6.93□□□□□ -1.3
LINC01550-205ENST00000556138 GALNT12Q8IXK2 581 aa6.93□□□□□ -1.3
LINC01550-205ENST00000556138 RBCK1Q9BYM8 510 aa6.93□□□□□ -1.3
LINC01550-205ENST00000556138 BHLHE41Q9C0J9 482 aaPredicted RBP6.93□□□□□ -1.3
LINC01550-205ENST00000556138 NIF3L1Q9GZT8 377 aa6.93□□□□□ -1.3
LINC01550-205ENST00000556138 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
LINC01550-205ENST00000556138 BIN2Q9UBW5 565 aaPredicted RBP6.93□□□□□ -1.3
LINC01550-205ENST00000556138 DYRK3O43781 588 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 PDE3BQ13370 1112 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.92□□□□□ -1.3
LINC01550-205ENST00000556138 TMEM130Q8N3G9 435 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 TMC1Q8TDI8 760 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 UBASH3BQ8TF42 649 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 CITED4Q96RK1 184 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 TCF12Q99081 682 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 TRAIPQ9BWF2 469 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 AKTIPQ9H8T0 292 aa6.92□□□□□ -1.3
LINC01550-205ENST00000556138 SOX1O00570 391 aaPredicted RBP6.91□□□□□ -1.3
LINC01550-205ENST00000556138 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
LINC01550-205ENST00000556138 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 FAM117BQ6P1L5 589 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 KIAA1211Q6ZU35 1233 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 TMC7Q7Z402 723 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 SLC7A3Q8WY07 619 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 BSNDQ8WZ55 320 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 NPHS2Q9NP85 383 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 SEC31BQ9NQW1 1179 aa6.91□□□□□ -1.3
LINC01550-205ENST00000556138 CPNE3O75131 537 aaKnown RBP6.9□□□□□ -1.3
LINC01550-205ENST00000556138 GRIA4P48058 902 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms