RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 MPNDQ8N594 471 aa8.56□□□□□ -1.04
PCNX1-210ENST00000555780 TBC1D16Q8TBP0 767 aa8.56□□□□□ -1.04
PCNX1-210ENST00000555780 ARHGAP45Q92619 1136 aa8.56□□□□□ -1.04
PCNX1-210ENST00000555780 MEIS3Q99687 375 aa8.56□□□□□ -1.04
PCNX1-210ENST00000555780 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
PCNX1-210ENST00000555780 MINPP1Q9UNW1 487 aa8.56□□□□□ -1.04
PCNX1-210ENST00000555780 GLTPD2A6NH11 291 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 KIAA2012Q0VF49 1180 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 SOGA3Q5TF21 947 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 KLHDC4Q8TBB5 520 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 RRAGCQ9HB90 399 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 BSDC1Q9NW68 430 aaPredicted RBP8.55□□□□□ -1.04
PCNX1-210ENST00000555780 PODXL2Q9NZ53 605 aa8.55□□□□□ -1.04
PCNX1-210ENST00000555780 NSFL1CQ9UNZ2 370 aaKnown RBP8.55□□□□□ -1.04
PCNX1-210ENST00000555780 CACNA1FO60840 1977 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 SHTN1A0MZ66 631 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 PLIN1O60240 522 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 CXCL9Q07325 125 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 LRRC24Q50LG9 513 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 DPP8Q6V1X1 898 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-210ENST00000555780 ANKRD18AQ8IVF6 992 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-210ENST00000555780 FRAT1Q92837 279 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-210ENST00000555780 API5Q9BZZ5 524 aaKnown RBP8.54□□□□□ -1.04
PCNX1-210ENST00000555780 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-210ENST00000555780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-210ENST00000555780 TIAM2Q8IVF5 1701 aa8.54□□□□□ -1.04
PCNX1-210ENST00000555780 PPIP5K2O43314 1243 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 TAF5LO75529 589 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 CCT4P50991 539 aaKnown RBP8.53□□□□□ -1.04
PCNX1-210ENST00000555780 C20orf194Q5TEA3 1177 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 TMC4Q7Z404 712 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 PANK1Q8TE04 598 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-210ENST00000555780 RIPOR2Q9Y4F9 1068 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 CCDC88AQ3V6T2 1871 aa8.53□□□□□ -1.04
PCNX1-210ENST00000555780 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
PCNX1-210ENST00000555780 ANKRD18BA2A2Z9 1011 aa8.52□□□□□ -1.05
PCNX1-210ENST00000555780 SCNN1DP51172 638 aa8.52□□□□□ -1.05
PCNX1-210ENST00000555780 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
PCNX1-210ENST00000555780 CHRNDQ07001 517 aa8.52□□□□□ -1.05
PCNX1-210ENST00000555780 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
PCNX1-210ENST00000555780 YTHDC1Q96MU7 727 aaKnown RBP8.52□□□□□ -1.05
PCNX1-210ENST00000555780 DBNDD1Q9H9R9 158 aa8.52□□□□□ -1.05
PCNX1-210ENST00000555780 LRRFIP2Q9Y608 721 aaKnown RBP8.52□□□□□ -1.05
PCNX1-210ENST00000555780 KIF16BQ96L93 1317 aa8.52□□□□□ -1.05
PCNX1-210ENST00000555780 DICER1Q9UPY3 1922 aaKnown RBP8.51□□□□□ -1.05
PCNX1-210ENST00000555780 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 ZBTB7BO15156 539 aaPredicted RBP8.51□□□□□ -1.05
PCNX1-210ENST00000555780 RAD17O75943 681 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 UFL1O94874 794 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 IFIT5Q13325 482 aaKnown RBP8.51□□□□□ -1.05
PCNX1-210ENST00000555780 WASHC4Q2M389 1173 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 GRIPAP1Q4V328 841 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 ZKSCAN2Q63HK3 967 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 ATG9AQ7Z3C6 839 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 VGLL2Q8N8G2 317 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 CDC5LQ99459 802 aaKnown RBP8.51□□□□□ -1.05
PCNX1-210ENST00000555780 MXD3Q9BW11 206 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 VPS33BQ9H267 617 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
PCNX1-210ENST00000555780 WDR90Q96KV7 1748 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 XDHP47989 1333 aa8.51□□□□□ -1.05
PCNX1-210ENST00000555780 PNMA6EA0A0J9YXQ4 647 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 EGFRP00533 1210 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 HSP90B1P14625 803 aaKnown RBP8.5□□□□□ -1.05
PCNX1-210ENST00000555780 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 EPS15P42566 896 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 C1QTNF8P60827 252 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 SUPT20HQ8NEM7 779 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 TAF1DQ9H5J8 278 aaPredicted RBP8.5□□□□□ -1.05
PCNX1-210ENST00000555780 C1orf115Q9H7X2 142 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 GGA1Q9UJY5 639 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 RCAN3Q9UKA8 241 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 ZNRF3Q9ULT6 936 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 CHMP3Q9Y3E7 222 aa8.5□□□□□ -1.05
PCNX1-210ENST00000555780 PSMD14O00487 310 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 ECE2O60344 883 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
PCNX1-210ENST00000555780 FGFR2P21802 821 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 IGHMBP2P38935 993 aaKnown RBP8.49□□□□□ -1.05
PCNX1-210ENST00000555780 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
PCNX1-210ENST00000555780 MTX1Q13505 466 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 LDHAL6AQ6ZMR3 332 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 NIM1KQ8IY84 436 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
PCNX1-210ENST00000555780 GPC2Q8N158 579 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 GMLQ99445 158 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 ANKIB1Q9P2G1 1089 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 GJA3Q9Y6H8 435 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 ZNF804BA4D1E1 1349 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 KDM2BQ8NHM5 1336 aa8.49□□□□□ -1.05
PCNX1-210ENST00000555780 MED23Q9ULK4 1368 aa8.48□□□□□ -1.05
PCNX1-210ENST00000555780 A0A1B0GUL6 1792 aa8.48□□□□□ -1.05
PCNX1-210ENST00000555780 SCN9AQ15858 1988 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms