RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 HTRA3P83110 453 aa21.53■■□□□ 1.04
PSEN1-212ENST00000555254 LRRC24Q50LG9 513 aa21.53■■□□□ 1.04
PSEN1-212ENST00000555254 ATG9AQ7Z3C6 839 aa21.53■■□□□ 1.04
PSEN1-212ENST00000555254 SUPT20HQ8NEM7 779 aa21.53■■□□□ 1.04
PSEN1-212ENST00000555254 TTC41PQ6P2S7 1318 aa21.53■■□□□ 1.04
PSEN1-212ENST00000555254 C6orf229H3BNL8 230 aa21.52■■□□□ 1.04
PSEN1-212ENST00000555254 EIF5BO60841 1220 aaKnown RBP21.52■■□□□ 1.04
PSEN1-212ENST00000555254 TNNI3KQ59H18 835 aa21.52■■□□□ 1.04
PSEN1-212ENST00000555254 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
PSEN1-212ENST00000555254 ECHDC1Q9NTX5 307 aa21.52■■□□□ 1.04
PSEN1-212ENST00000555254 ANKIB1Q9P2G1 1089 aa21.52■■□□□ 1.04
PSEN1-212ENST00000555254 FPGT-TNNI3KV9GXZ4 949 aa21.52■■□□□ 1.04
PSEN1-212ENST00000555254 PPIP5K2O43314 1243 aa21.51■■□□□ 1.03
PSEN1-212ENST00000555254 METTL24Q5JXM2 366 aa21.51■■□□□ 1.03
PSEN1-212ENST00000555254 JDP2Q8WYK2 163 aa21.51■■□□□ 1.03
PSEN1-212ENST00000555254 KLRG1Q96E93 195 aa21.51■■□□□ 1.03
PSEN1-212ENST00000555254 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
PSEN1-212ENST00000555254 CCDC8Q9H0W5 538 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-212ENST00000555254 SNED1Q8TER0 1413 aa21.5■■□□□ 1.03
PSEN1-212ENST00000555254 GLRX3O76003 335 aaKnown RBP21.5■■□□□ 1.03
PSEN1-212ENST00000555254 AOC3Q16853 763 aa21.5■■□□□ 1.03
PSEN1-212ENST00000555254 DPY19L2Q6NUT2 758 aa21.5■■□□□ 1.03
PSEN1-212ENST00000555254 CASC1Q6TDU7 716 aa21.5■■□□□ 1.03
PSEN1-212ENST00000555254 EAF2Q96CJ1 260 aaPredicted RBP21.5■■□□□ 1.03
PSEN1-212ENST00000555254 SALL3Q9BXA9 1300 aa21.5■■□□□ 1.03
PSEN1-212ENST00000555254 ZC3H4Q9UPT8 1303 aaKnown RBP21.5■■□□□ 1.03
PSEN1-212ENST00000555254 COL4A1P02462 1669 aa21.5■■□□□ 1.03
PSEN1-212ENST00000555254 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
PSEN1-212ENST00000555254 C8orf34Q49A92 452 aa21.49■■□□□ 1.03
PSEN1-212ENST00000555254 NEUROD6Q96NK8 337 aa21.49■■□□□ 1.03
PSEN1-212ENST00000555254 RTFDC1Q9BY42 306 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-212ENST00000555254 BSDC1Q9NW68 430 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-212ENST00000555254 RIPOR2Q9Y4F9 1068 aa21.49■■□□□ 1.03
PSEN1-212ENST00000555254 TAF1P21675 1872 aa21.49■■□□□ 1.03
PSEN1-212ENST00000555254 MROH5Q6ZUA9 1318 aa21.49■■□□□ 1.03
PSEN1-212ENST00000555254 GLTPD2A6NH11 291 aa21.48■■□□□ 1.03
PSEN1-212ENST00000555254 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
PSEN1-212ENST00000555254 NIM1KQ8IY84 436 aa21.48■■□□□ 1.03
PSEN1-212ENST00000555254 GPR101Q96P66 508 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-212ENST00000555254 NMRK2Q9NPI5 230 aa21.48■■□□□ 1.03
PSEN1-212ENST00000555254 POLLQ9UGP5 575 aa21.48■■□□□ 1.03
PSEN1-212ENST00000555254 TRIM6-TRIM34B2RNG4 842 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 CDC45O75419 566 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 TOMM70O94826 608 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 UFL1O94874 794 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 GORABQ5T7V8 394 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 TBC1D16Q8TBP0 767 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 RRAGCQ9HB90 399 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 MINPP1Q9UNW1 487 aa21.47■■□□□ 1.03
PSEN1-212ENST00000555254 GSPT1P15170 499 aaKnown RBP21.46■■□□□ 1.03
PSEN1-212ENST00000555254 TSHZ3Q63HK5 1081 aa21.46■■□□□ 1.03
PSEN1-212ENST00000555254 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
PSEN1-212ENST00000555254 SBF1O95248 1867 aa21.45■■□□□ 1.02
PSEN1-212ENST00000555254 DDNO94850 711 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-212ENST00000555254 SDSP20132 328 aa21.45■■□□□ 1.02
PSEN1-212ENST00000555254 RILPL2Q969X0 211 aa21.45■■□□□ 1.02
PSEN1-212ENST00000555254 EYA3Q99504 573 aa21.45■■□□□ 1.02
PSEN1-212ENST00000555254 VPS33BQ9H267 617 aa21.45■■□□□ 1.02
PSEN1-212ENST00000555254 FZD9O00144 591 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 EIF6P56537 245 aaKnown RBP21.44■■□□□ 1.02
PSEN1-212ENST00000555254 KIAA2012Q0VF49 1180 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 ATP2B3Q16720 1220 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 CNTROBQ8N137 903 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 PODXL2Q9NZ53 605 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 GJA3Q9Y6H8 435 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 MYH3P11055 1940 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 XDHP47989 1333 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 ZNF541Q9H0D2 1346 aa21.44■■□□□ 1.02
PSEN1-212ENST00000555254 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 WTIPA6NIX2 430 aaPredicted RBP21.43■■□□□ 1.02
PSEN1-212ENST00000555254 G3V3G9 751 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 TIMM10P62072 90 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 DOK7Q18PE1 504 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 CCDC158Q5M9N0 1113 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 DCAF8Q5TAQ9 597 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 PI4K2BQ8TCG2 481 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 ZC3H12CQ9C0D7 883 aaKnown RBP21.43■■□□□ 1.02
PSEN1-212ENST00000555254 ZNRF3Q9ULT6 936 aa21.43■■□□□ 1.02
PSEN1-212ENST00000555254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
PSEN1-212ENST00000555254 PDE8BO95263 885 aa21.42■■□□□ 1.02
PSEN1-212ENST00000555254 ATP5JP18859 108 aa21.42■■□□□ 1.02
PSEN1-212ENST00000555254 ATP2B4P23634 1241 aa21.42■■□□□ 1.02
PSEN1-212ENST00000555254 HELBQ8NG08 1087 aaPredicted RBP21.42■■□□□ 1.02
PSEN1-212ENST00000555254 DBNDD2Q9BQY9 259 aa21.42■■□□□ 1.02
PSEN1-212ENST00000555254 ANKRD2Q9GZV1 360 aa21.42■■□□□ 1.02
PSEN1-212ENST00000555254 PCDH10Q9P2E7 1040 aa21.42■■□□□ 1.02
PSEN1-212ENST00000555254 DBNLQ9UJU6 430 aaKnown RBP21.42■■□□□ 1.02
PSEN1-212ENST00000555254 SLC5A1P13866 664 aa21.41■■□□□ 1.02
PSEN1-212ENST00000555254 CHRNDQ07001 517 aa21.41■■□□□ 1.02
PSEN1-212ENST00000555254 PUM3Q15397 648 aaKnown RBP21.41■■□□□ 1.02
PSEN1-212ENST00000555254 TLR7Q9NYK1 1049 aaKnown RBP21.41■■□□□ 1.02
PSEN1-212ENST00000555254 KCNJ4P48050 445 aa21.4■■□□□ 1.02
PSEN1-212ENST00000555254 LPIN2Q92539 896 aa21.4■■□□□ 1.02
PSEN1-212ENST00000555254 DBNDD1Q9H9R9 158 aa21.4■■□□□ 1.02
PSEN1-212ENST00000555254 RBM19Q9Y4C8 960 aaKnown RBP21.4■■□□□ 1.02
PSEN1-212ENST00000555254 COL4A5P29400 1685 aa21.4■■□□□ 1.02
PSEN1-212ENST00000555254 CCDC88AQ3V6T2 1871 aa21.39■■□□□ 1.02
PSEN1-212ENST00000555254 TAF5LO75529 589 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms