RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TXNDC11Q6PKC3 985 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 GALNT11Q8NCW6 608 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 HELQQ8TDG4 1101 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 RASSF4Q9H2L5 321 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 ELP3Q9H9T3 547 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 KANSL3Q9P2N6 904 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 USP21Q9UK80 565 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 GHRHP01286 108 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 CDC25BP30305 580 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 EIF1AXP47813 144 aaKnown RBP2.83□□□□□ -1.96
PRPF39-208ENST00000554785 DNM1Q05193 864 aaKnown RBP2.83□□□□□ -1.96
PRPF39-208ENST00000554785 CEP120Q8N960 986 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 C1orf127Q8N9H9 656 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 WFDC12Q8WWY7 111 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 EDEM1Q92611 657 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 MEGF10Q96KG7 1140 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 HHIPQ96QV1 700 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 LACRTQ9GZZ8 138 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 ABI2Q9NYB9 513 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-208ENST00000554785 LINC01387J3KSC0 135 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 KIF4AO95239 1232 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 PDGFAP04085 211 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 CEP135Q66GS9 1140 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 IGF2-ASQ6U949 168 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 POP1Q99575 1024 aaKnown RBP2.83□□□□□ -1.96
PRPF39-208ENST00000554785 SRA1Q9HD15 236 aaKnown RBP2.83□□□□□ -1.96
PRPF39-208ENST00000554785 ANO2Q9NQ90 1003 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 PCMTD2Q9NV79 361 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 KCNK4Q9NYG8 393 aa2.83□□□□□ -1.96
PRPF39-208ENST00000554785 NFKBIEO00221 500 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 PSPNO60542 156 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 WISP1O95388 367 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 ARID4AP29374 1257 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-208ENST00000554785 C8orf34Q49A92 452 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 TTC39BQ5VTQ0 682 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-208ENST00000554785 AGGF1Q8N302 714 aaeCLIP2.82□□□□□ -1.96
PRPF39-208ENST00000554785 ABTB2Q8N961 1025 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 CARD10Q9BWT7 1032 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 CHRDQ9H2X0 955 aa2.82□□□□□ -1.96
PRPF39-208ENST00000554785 SH2B1Q9NRF2 756 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-208ENST00000554785 DDX3YO15523 660 aaKnown RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 EPHA1P21709 976 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 HYAL2Q12891 473 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 ZNF211Q13398 564 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 ECM1Q16610 540 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 NOM1Q5C9Z4 860 aaKnown RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 PDE12Q6L8Q7 609 aaKnown RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 INTS5Q6P9B9 1019 aaKnown RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 ZNF438Q7Z4V0 828 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 PBX4Q9BYU1 374 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 CCDC87Q9NVE4 849 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 FAM13BQ9NYF5 915 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 SALL4Q9UJQ4 1053 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 POLIQ9UNA4 740 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 FNDC3AQ9Y2H6 1198 aaKnown RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 RNF114Q9Y508 228 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 PPME1Q9Y570 386 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 FZD6O60353 706 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 NPR3P17342 541 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 HGSNATQ68CP4 663 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 XKR5Q6UX68 686 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 NCAPG2Q86XI2 1143 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 MAP4K3Q8IVH8 894 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 DZIP1LQ8IYY4 767 aaKnown RBP2.81□□□□□ -1.96
PRPF39-208ENST00000554785 CACTIN-AS1Q8N1I8 211 aa2.81□□□□□ -1.96
PRPF39-208ENST00000554785 F8W735 103 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-208ENST00000554785 EREGO14944 169 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 ADAM11O75078 769 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 ABL1P00519 1130 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 PDIA4P13667 645 aaKnown RBP2.8□□□□□ -1.96
PRPF39-208ENST00000554785 MZF1P28698 734 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-208ENST00000554785 SERPINB4P48594 390 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 PRR23CQ6ZRP0 262 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 TMEM130Q8N3G9 435 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 RETREG2Q8NC44 543 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 KLHDC7BQ96G42 594 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 SPACA7Q96KW9 195 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 UBL7Q96S82 380 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-208ENST00000554785 RBSNQ9H1K0 784 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 AKTIPQ9H8T0 292 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 LATS2Q9NRM7 1088 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 DZANK1Q9NVP4 752 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 FOXD3Q9UJU5 478 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-208ENST00000554785 KRTAP9-7A8MTY7 169 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 FSCN2O14926 492 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 TNFRSF21O75509 655 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 SMNDC1O75940 238 aaKnown RBP eCLIP2.8□□□□□ -1.966e-25■■■□□ 17.2
PRPF39-208ENST00000554785 CES1P23141 567 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 GRIK1P39086 918 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 PDE4CQ08493 712 aa2.8□□□□□ -1.96
PRPF39-208ENST00000554785 FOXD4L4Q8WXT5 416 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-208ENST00000554785 CDC27P30260 824 aa2.79□□□□□ -1.96
PRPF39-208ENST00000554785 CD68P34810 354 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-208ENST00000554785 FKBP4Q02790 459 aaKnown RBP eCLIP2.79□□□□□ -1.96
PRPF39-208ENST00000554785 FBLN7Q53RD9 439 aa2.79□□□□□ -1.96
PRPF39-208ENST00000554785 PEAR1Q5VY43 1037 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-208ENST00000554785 KIAA1211Q6ZU35 1233 aa2.79□□□□□ -1.96
PRPF39-208ENST00000554785 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.79□□□□□ -1.96
PRPF39-208ENST00000554785 UBASH3BQ8TF42 649 aa2.79□□□□□ -1.96
PRPF39-208ENST00000554785 ZKSCAN3Q9BRR0 538 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms