RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 SERPINB2P05120 415 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 CAMK4Q16566 473 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 MFSD6Q6ZSS7 791 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 RBM27Q9P2N5 1060 aaKnown RBP18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 CRB1P82279 1406 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 MBD4O95243 580 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 CCDC96Q2M329 555 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 WDR78Q5VTH9 848 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 PI16Q6UXB8 463 aa18.92■□□□□ 0.62
PPP4R3A-205ENST00000554684 CCDC171Q6TFL3 1326 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 TRMT1LQ7Z2T5 733 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 BRMS1Q9HCU9 246 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 GGA1Q9UJY5 639 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 PPLO60437 1756 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 LDHBP07195 334 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 MMP10P09238 476 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 ADORA1P30542 326 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 TMEM67Q5HYA8 995 aa18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 GPR101Q96P66 508 aaPredicted RBP18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 SEC62Q99442 399 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 PCCAP05165 728 aaPredicted RBP18.91■□□□□ 0.62
PPP4R3A-205ENST00000554684 IBTKQ9P2D0 1353 aaPredicted RBP18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 HOMER1Q86YM7 354 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 LARGE2Q8N3Y3 721 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 SAP30BPQ9UHR5 308 aaKnown RBP18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 CFAP45Q9UL16 551 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 MST1RQ04912 1400 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 SPATA31A1Q5TZJ5 1347 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 ARMT1Q9H993 441 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 SLC12A7Q9Y666 1083 aa18.9■□□□□ 0.62
PPP4R3A-205ENST00000554684 SPTY2D1Q68D10 685 aaPredicted RBP18.89■□□□□ 0.62
PPP4R3A-205ENST00000554684 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.62
PPP4R3A-205ENST00000554684 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.62
PPP4R3A-205ENST00000554684 TRIM5Q9C035 493 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 PSDA5PKW4 1024 aaPredicted RBP18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 Q6ZUG5 572 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 FEZ1Q99689 392 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 RNF113AO15541 343 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 GTF2IP78347 998 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 TXNRD1Q16881 649 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 C8orf76Q96K31 380 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 ANKRD2Q9GZV1 360 aa18.89■□□□□ 0.61
PPP4R3A-205ENST00000554684 MAGEB6P1A0A0J9YX57 407 aa18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 CDKL5O76039 1030 aa18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 AATFQ9NY61 560 aaKnown RBP eCLIP18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 ZFYP08048 801 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 LPIN2Q92539 896 aa18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 ARHGEF1Q92888 912 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-205ENST00000554684 CCDC192P0DO97 292 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 NUP62CLQ9H1M0 184 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 LETM1O95202 739 aaPredicted RBP18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 CHRNDQ07001 517 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 TCP10Q12799 353 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 SLF2Q8IX21 1173 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 CTCFLQ8NI51 663 aaPredicted RBP18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 PHKA1P46020 1223 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 PRKG1Q13976 671 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 RAB3GAP1Q15042 981 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 VPS72Q15906 364 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 SPC24Q8NBT2 197 aa18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 CCDC43Q96MW1 224 aaKnown RBP18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 HOOK1Q9UJC3 728 aaKnown RBP18.87■□□□□ 0.61
PPP4R3A-205ENST00000554684 DEFB132Q7Z7B7 95 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 NCOA7Q8NI08 942 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 ERBB4Q15303 1308 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 KLF18A0A0U1RQI7 1052 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 GOLGA8AA7E2F4 631 aa18.86■□□□□ 0.61
PPP4R3A-205ENST00000554684 HMGN5P82970 282 aaKnown RBP18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 ORC3Q9UBD5 711 aaPredicted RBP18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 EIF6P56537 245 aaKnown RBP18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 SCAND2PQ9GZW5 306 aaPredicted RBP18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 DBNLQ9UJU6 430 aaKnown RBP18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 KIAA0825Q8IV33 1275 aa18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 AOX1Q06278 1338 aa18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 RAD50Q92878 1312 aa18.85■□□□□ 0.61
PPP4R3A-205ENST00000554684 PPIP5K2O43314 1243 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 MCM5P33992 734 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 JMYQ8N9B5 988 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 RNF41Q9H4P4 317 aaPredicted RBP18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 SCNN1DP51172 638 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 PDE4BQ07343 736 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 NOC3LQ8WTT2 800 aaKnown RBP18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 CCDC102BQ68D86 513 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 CKAP2LQ8IYA6 745 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 ZNF287Q9HBT7 754 aa18.84■□□□□ 0.61
PPP4R3A-205ENST00000554684 KLHL40Q2TBA0 621 aa18.83■□□□□ 0.61
PPP4R3A-205ENST00000554684 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms