RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MYO3BQ8WXR4 1341 aa31.09■■■□□ 2.57
FOXA1-204ENST00000554607 MMP14P50281 582 aa31.09■■■□□ 2.57
FOXA1-204ENST00000554607 TSPYL6Q8N831 410 aa31.09■■■□□ 2.57
FOXA1-204ENST00000554607 GREM2Q9H772 168 aa31.09■■■□□ 2.57
FOXA1-204ENST00000554607 CCT4P50991 539 aaKnown RBP31.08■■■□□ 2.57
FOXA1-204ENST00000554607 COA1Q9GZY4 146 aa31.08■■■□□ 2.57
FOXA1-204ENST00000554607 DACT2Q5SW24 774 aa31.07■■■□□ 2.56
FOXA1-204ENST00000554607 STRIP1Q5VSL9 837 aa31.07■■■□□ 2.56
FOXA1-204ENST00000554607 CTU1Q7Z7A3 348 aaKnown RBP31.07■■■□□ 2.56
FOXA1-204ENST00000554607 LEMD3Q9Y2U8 911 aa31.07■■■□□ 2.56
FOXA1-204ENST00000554607 IGHMBP2P38935 993 aaKnown RBP31.06■■■□□ 2.56
FOXA1-204ENST00000554607 WTIPA6NIX2 430 aaPredicted RBP31.05■■■□□ 2.56
FOXA1-204ENST00000554607 NEURL1BA8MQ27 555 aa31.05■■■□□ 2.56
FOXA1-204ENST00000554607 NF2P35240 595 aa31.05■■■□□ 2.56
FOXA1-204ENST00000554607 NBPF9Q3BBW0 867 aa31.05■■■□□ 2.56
FOXA1-204ENST00000554607 FBXW7Q969H0 707 aa31.05■■■□□ 2.56
FOXA1-204ENST00000554607 MYH3P11055 1940 aa31.04■■■□□ 2.56
FOXA1-204ENST00000554607 H7C1W4 665 aa31.04■■■□□ 2.56
FOXA1-204ENST00000554607 CWF19L2Q2TBE0 894 aaKnown RBP31.04■■■□□ 2.56
FOXA1-204ENST00000554607 UBE2Q2LH0YL09 131 aa31.03■■■□□ 2.56
FOXA1-204ENST00000554607 TTLL12Q14166 644 aaPredicted RBP31.03■■■□□ 2.56
FOXA1-204ENST00000554607 SCAF8Q9UPN6 1271 aaKnown RBP31.03■■■□□ 2.56
FOXA1-204ENST00000554607 WNT10BO00744 389 aa31.02■■■□□ 2.56
FOXA1-204ENST00000554607 MOB2Q70IA6 237 aa31.02■■■□□ 2.56
FOXA1-204ENST00000554607 TSR2Q969E8 191 aaKnown RBP31.02■■■□□ 2.56
FOXA1-204ENST00000554607 ANKRD2Q9GZV1 360 aa31.02■■■□□ 2.56
FOXA1-204ENST00000554607 PRAMEF18Q5VWM3 479 aa31.01■■■□□ 2.55
FOXA1-204ENST00000554607 UBE3BQ7Z3V4 1068 aa31.01■■■□□ 2.55
FOXA1-204ENST00000554607 MXD3Q9BW11 206 aa31.01■■■□□ 2.55
FOXA1-204ENST00000554607 SLC4A2P04920 1241 aa31■■■□□ 2.55
FOXA1-204ENST00000554607 TWISTNBQ3B726 338 aaPredicted RBP31■■■□□ 2.55
FOXA1-204ENST00000554607 TTLL5Q6EMB2 1281 aa31■■■□□ 2.55
FOXA1-204ENST00000554607 PLA2G12BQ9BX93 195 aa31■■■□□ 2.55
FOXA1-204ENST00000554607 HDAC9Q9UKV0 1011 aa31■■■□□ 2.55
FOXA1-204ENST00000554607 ZNF804BA4D1E1 1349 aa30.99■■■□□ 2.55
FOXA1-204ENST00000554607 PKN2Q16513 984 aaKnown RBP30.99■■■□□ 2.55
FOXA1-204ENST00000554607 CCDC27Q2M243 656 aa30.99■■■□□ 2.55
FOXA1-204ENST00000554607 MPHOSPH8Q99549 860 aa30.99■■■□□ 2.55
FOXA1-204ENST00000554607 SOX10P56693 466 aa30.98■■■□□ 2.55
FOXA1-204ENST00000554607 SPEF2Q9C093 1822 aa30.98■■■□□ 2.55
FOXA1-204ENST00000554607 ITGA6P23229 1130 aa30.97■■■□□ 2.55
FOXA1-204ENST00000554607 TM4SF4P48230 202 aa30.97■■■□□ 2.55
FOXA1-204ENST00000554607 GCKRQ14397 625 aa30.97■■■□□ 2.55
FOXA1-204ENST00000554607 G2E3Q7L622 706 aa30.97■■■□□ 2.55
FOXA1-204ENST00000554607 TXNRD3Q86VQ6 643 aa30.97■■■□□ 2.55
FOXA1-204ENST00000554607 ARMC9Q7Z3E5 817 aa30.96■■■□□ 2.55
FOXA1-204ENST00000554607 APOBEC3FQ8IUX4 373 aaKnown RBP30.96■■■□□ 2.55
FOXA1-204ENST00000554607 MYH16Q9H6N6 1097 aa30.96■■■□□ 2.55
FOXA1-204ENST00000554607 SASH1O94885 1247 aa30.94■■■□□ 2.54
FOXA1-204ENST00000554607 TBC1D8O95759 1140 aa30.94■■■□□ 2.54
FOXA1-204ENST00000554607 CSF1RP07333 972 aa30.94■■■□□ 2.54
FOXA1-204ENST00000554607 KCNJ4P48050 445 aa30.94■■■□□ 2.54
FOXA1-204ENST00000554607 SREBF2Q12772 1141 aa30.94■■■□□ 2.54
FOXA1-204ENST00000554607 NOM1Q5C9Z4 860 aaKnown RBP30.94■■■□□ 2.54
FOXA1-204ENST00000554607 WWC1Q8IX03 1113 aa30.94■■■□□ 2.54
FOXA1-204ENST00000554607 TNRC18O15417 2968 aaPredicted RBP30.94■■■□□ 2.54
FOXA1-204ENST00000554607 KIAA0825Q8IV33 1275 aa30.93■■■□□ 2.54
FOXA1-204ENST00000554607 ZNF296Q8WUU4 475 aaPredicted RBP30.93■■■□□ 2.54
FOXA1-204ENST00000554607 GTF2IP78347 998 aa30.92■■■□□ 2.54
FOXA1-204ENST00000554607 FLIIQ13045 1269 aa30.92■■■□□ 2.54
FOXA1-204ENST00000554607 HPS5Q9UPZ3 1129 aa30.92■■■□□ 2.54
FOXA1-204ENST00000554607 PDE4DIPQ5VU43 2346 aa30.92■■■□□ 2.54
FOXA1-204ENST00000554607 IL16Q14005 1332 aa30.92■■■□□ 2.54
FOXA1-204ENST00000554607 ZNF646O15015 1829 aaPredicted RBP30.91■■■□□ 2.54
FOXA1-204ENST00000554607 CASP7P55210 303 aa30.91■■■□□ 2.54
FOXA1-204ENST00000554607 LINS1Q8NG48 757 aa30.91■■■□□ 2.54
FOXA1-204ENST00000554607 DNAAF4Q8WXU2 420 aa30.91■■■□□ 2.54
FOXA1-204ENST00000554607 KLRK1P26718 216 aa30.9■■■□□ 2.54
FOXA1-204ENST00000554607 PTPN12Q05209 780 aaKnown RBP30.9■■■□□ 2.54
FOXA1-204ENST00000554607 CHRNDQ07001 517 aa30.9■■■□□ 2.54
FOXA1-204ENST00000554607 FKBP5Q13451 457 aaPredicted RBP30.9■■■□□ 2.54
FOXA1-204ENST00000554607 ZBED3Q96IU2 234 aaPredicted RBP30.9■■■□□ 2.54
FOXA1-204ENST00000554607 CD209Q9NNX6 404 aa30.9■■■□□ 2.54
FOXA1-204ENST00000554607 ANKRD18BA2A2Z9 1011 aa30.89■■■□□ 2.54
FOXA1-204ENST00000554607 GPR25O00155 361 aa30.89■■■□□ 2.54
FOXA1-204ENST00000554607 NCBP3Q53F19 620 aaKnown RBP30.89■■■□□ 2.54
FOXA1-204ENST00000554607 MKRN3Q13064 507 aaKnown RBP30.88■■■□□ 2.53
FOXA1-204ENST00000554607 CFHR5Q9BXR6 569 aa30.88■■■□□ 2.53
FOXA1-204ENST00000554607 PRKG1Q13976 671 aa30.87■■■□□ 2.53
FOXA1-204ENST00000554607 DLGAP5Q15398 846 aa30.87■■■□□ 2.53
FOXA1-204ENST00000554607 LDLRAD1Q5T700 205 aa30.87■■■□□ 2.53
FOXA1-204ENST00000554607 C15orf52Q6ZUT6 534 aaKnown RBP30.86■■■□□ 2.53
FOXA1-204ENST00000554607 ANGEL1Q9UNK9 670 aaKnown RBP30.86■■■□□ 2.53
FOXA1-204ENST00000554607 COL1A1P02452 1464 aaPredicted RBP30.86■■■□□ 2.53
FOXA1-204ENST00000554607 ALDH1A1P00352 501 aa30.85■■■□□ 2.53
FOXA1-204ENST00000554607 DEFB129Q9H1M3 183 aa30.85■■■□□ 2.53
FOXA1-204ENST00000554607 IFIT5Q13325 482 aaKnown RBP30.84■■■□□ 2.53
FOXA1-204ENST00000554607 SPRYD7Q5W111 196 aa30.84■■■□□ 2.53
FOXA1-204ENST00000554607 MTMR14Q8NCE2 650 aa30.84■■■□□ 2.53
FOXA1-204ENST00000554607 CACNA1FO60840 1977 aa30.83■■■□□ 2.53
FOXA1-204ENST00000554607 FKTNO75072 461 aa30.83■■■□□ 2.53
FOXA1-204ENST00000554607 INHBEP58166 350 aa30.83■■■□□ 2.53
FOXA1-204ENST00000554607 FBXO46Q6PJ61 603 aaPredicted RBP30.83■■■□□ 2.53
FOXA1-204ENST00000554607 PPP2R3BQ9Y5P8 575 aa30.83■■■□□ 2.53
FOXA1-204ENST00000554607 MYO1BO43795 1136 aa30.82■■■□□ 2.52
FOXA1-204ENST00000554607 SLC10A4Q96EP9 437 aa30.82■■■□□ 2.52
FOXA1-204ENST00000554607 PCDH10Q9P2E7 1040 aa30.82■■■□□ 2.52
FOXA1-204ENST00000554607 PPP1R12BO60237 982 aaPredicted RBP30.81■■■□□ 2.52
FOXA1-204ENST00000554607 TAF5LO75529 589 aa30.81■■■□□ 2.52
FOXA1-204ENST00000554607 MAP3K11Q16584 847 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms