RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 GPR101Q96P66 508 aaPredicted RBP9.51□□□□□ -0.89
LINC00640-201ENST00000554409 BCL2L13Q9BXK5 485 aa9.51□□□□□ -0.89
LINC00640-201ENST00000554409 ZC3H12CQ9C0D7 883 aaKnown RBP9.51□□□□□ -0.89
LINC00640-201ENST00000554409 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
LINC00640-201ENST00000554409 ADARB2Q9NS39 739 aaKnown RBP9.51□□□□□ -0.89
LINC00640-201ENST00000554409 MAP3K13O43283 966 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
LINC00640-201ENST00000554409 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
LINC00640-201ENST00000554409 RPS12P25398 132 aaKnown RBP9.5□□□□□ -0.89
LINC00640-201ENST00000554409 CCT4P50991 539 aaKnown RBP9.5□□□□□ -0.89
LINC00640-201ENST00000554409 RARSP54136 660 aaKnown RBP9.5□□□□□ -0.89
LINC00640-201ENST00000554409 IFIT5Q13325 482 aaKnown RBP9.5□□□□□ -0.89
LINC00640-201ENST00000554409 EPHA10Q5JZY3 1008 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 DNAJC5GQ8N7S2 189 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 DPF2Q92785 391 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 MPHOSPH8Q99549 860 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 TRPM7Q96QT4 1865 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
LINC00640-201ENST00000554409 PSMD14O00487 310 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
LINC00640-201ENST00000554409 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
LINC00640-201ENST00000554409 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00640-201ENST00000554409 CHRNDQ07001 517 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 CCDC57Q2TAC2 916 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 RABL6Q3YEC7 729 aaPredicted RBP9.49□□□□□ -0.89
LINC00640-201ENST00000554409 PODNQ7Z5L7 613 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 ARHGAP45Q92619 1136 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 MS4A3Q96HJ5 214 aa9.49□□□□□ -0.89
LINC00640-201ENST00000554409 WTIPA6NIX2 430 aaPredicted RBP9.48□□□□□ -0.89
LINC00640-201ENST00000554409 G3V3G9 751 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 H7C1D1 291 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 C15orf52Q6ZUT6 534 aaKnown RBP9.48□□□□□ -0.89
LINC00640-201ENST00000554409 MICALL2Q8IY33 904 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 API5Q9BZZ5 524 aaKnown RBP9.48□□□□□ -0.89
LINC00640-201ENST00000554409 COA1Q9GZY4 146 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 USP44Q9H0E7 712 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 KCNQ5Q9NR82 932 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 CNOT7Q9UIV1 285 aaKnown RBP9.48□□□□□ -0.89
LINC00640-201ENST00000554409 NOB1Q9ULX3 412 aaKnown RBP9.48□□□□□ -0.89
LINC00640-201ENST00000554409 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 ZNF804BA4D1E1 1349 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 ZBED9Q6R2W3 1325 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 IRS2Q9Y4H2 1338 aa9.48□□□□□ -0.89
LINC00640-201ENST00000554409 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
LINC00640-201ENST00000554409 HTRA3P83110 453 aa9.47□□□□□ -0.89
LINC00640-201ENST00000554409 MAP1SQ66K74 1059 aaPredicted RBP9.47□□□□□ -0.89
LINC00640-201ENST00000554409 LDHAL6AQ6ZMR3 332 aa9.47□□□□□ -0.89
LINC00640-201ENST00000554409 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
LINC00640-201ENST00000554409 AGBL3Q8NEM8 1001 aa9.47□□□□□ -0.89
LINC00640-201ENST00000554409 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
LINC00640-201ENST00000554409 BICC1Q9H694 974 aaKnown RBP9.47□□□□□ -0.89
LINC00640-201ENST00000554409 ARAP2Q8WZ64 1704 aa9.46□□□□□ -0.89
LINC00640-201ENST00000554409 SHTN1A0MZ66 631 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
LINC00640-201ENST00000554409 TAF7LQ5H9L4 462 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
LINC00640-201ENST00000554409 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 TXNRD3Q86VQ6 643 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 JMYQ8N9B5 988 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 TRPM4Q8TD43 1214 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 ZNF594Q96JF6 807 aaPredicted RBP9.46□□□□□ -0.9
LINC00640-201ENST00000554409 GMLQ99445 158 aa9.46□□□□□ -0.9
LINC00640-201ENST00000554409 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 TAF5LO75529 589 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 KLRK1P26718 216 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 KCNJ4P48050 445 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 ZNF280AP59817 542 aaPredicted RBP9.45□□□□□ -0.9
LINC00640-201ENST00000554409 STRIP1Q5VSL9 837 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
LINC00640-201ENST00000554409 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 RIPOR2Q9Y4F9 1068 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 MROH5Q6ZUA9 1318 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 MYO3BQ8WXR4 1341 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
LINC00640-201ENST00000554409 IPO8O15397 1037 aaKnown RBP9.44□□□□□ -0.9
LINC00640-201ENST00000554409 UBTFL1P0CB47 393 aaPredicted RBP9.44□□□□□ -0.9
LINC00640-201ENST00000554409 MMP14P50281 582 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 UBE4AQ14139 1066 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 DACT2Q5SW24 774 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
LINC00640-201ENST00000554409 PUS3Q9BZE2 481 aaKnown RBP9.44□□□□□ -0.9
LINC00640-201ENST00000554409 CD209Q9NNX6 404 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 HDAC5Q9UQL6 1122 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 CNTNAP1P78357 1384 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 ECM29Q5VYK3 1845 aa9.44□□□□□ -0.9
LINC00640-201ENST00000554409 POLR2AP24928 1970 aaKnown RBP9.43□□□□□ -0.9
LINC00640-201ENST00000554409 SNAP23O00161 211 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 BCAR3O75815 825 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms