RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 XDHP47989 1333 aa10.52□□□□□ -0.73
ACTN1-212ENST00000554158 MYBBP1AQ9BQG0 1328 aaKnown RBP10.52□□□□□ -0.73
ACTN1-212ENST00000554158 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 ATP2B4P23634 1241 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 TRIM28Q13263 835 aaKnown RBP10.51□□□□□ -0.73
ACTN1-212ENST00000554158 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 RASAL3Q86YV0 1011 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 CCDC191Q8NCU4 936 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 CWC25Q9NXE8 425 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-212ENST00000554158 PITPNM2Q9BZ72 1349 aa10.51□□□□□ -0.73
ACTN1-212ENST00000554158 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 ECM29Q5VYK3 1845 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 NEXNQ0ZGT2 675 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 SREBF2Q12772 1141 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 PODNQ7Z5L7 613 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 CCDC85AQ96PX6 553 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-212ENST00000554158 SEC31BQ9NQW1 1179 aa10.5□□□□□ -0.73
ACTN1-212ENST00000554158 PCCAP05165 728 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-212ENST00000554158 ZNF280AP59817 542 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-212ENST00000554158 GNAI1P63096 354 aa10.49□□□□□ -0.73
ACTN1-212ENST00000554158 PRPF38BQ5VTL8 546 aaKnown RBP10.49□□□□□ -0.73
ACTN1-212ENST00000554158 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
ACTN1-212ENST00000554158 ASTN2O75129 1339 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-212ENST00000554158 MYO3BQ8WXR4 1341 aa10.49□□□□□ -0.73
ACTN1-212ENST00000554158 ZNF609O15014 1411 aa10.49□□□□□ -0.73
ACTN1-212ENST00000554158 UBE2Q2LH0YL09 131 aa10.48□□□□□ -0.73
ACTN1-212ENST00000554158 ELL2O00472 640 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-212ENST00000554158 TBC1D8O95759 1140 aa10.48□□□□□ -0.73
ACTN1-212ENST00000554158 CCDC30Q5VVM6 783 aa10.48□□□□□ -0.73
ACTN1-212ENST00000554158 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
ACTN1-212ENST00000554158 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-212ENST00000554158 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
ACTN1-212ENST00000554158 HPS5Q9UPZ3 1129 aa10.48□□□□□ -0.73
ACTN1-212ENST00000554158 TNRC18O15417 2968 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-212ENST00000554158 COL4A1P02462 1669 aa10.47□□□□□ -0.73
ACTN1-212ENST00000554158 IGHMBP2P38935 993 aaKnown RBP10.47□□□□□ -0.73
ACTN1-212ENST00000554158 KCNJ4P48050 445 aa10.47□□□□□ -0.73
ACTN1-212ENST00000554158 MMP14P50281 582 aa10.47□□□□□ -0.73
ACTN1-212ENST00000554158 MKRN3Q13064 507 aaKnown RBP10.47□□□□□ -0.73
ACTN1-212ENST00000554158 APOBEC3FQ8IUX4 373 aaKnown RBP10.47□□□□□ -0.73
ACTN1-212ENST00000554158 ZNF296Q8WUU4 475 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-212ENST00000554158 STK31Q9BXU1 1019 aa10.47□□□□□ -0.73
ACTN1-212ENST00000554158 PHAXQ9H814 394 aaKnown RBP10.47□□□□□ -0.73
ACTN1-212ENST00000554158 MED23Q9ULK4 1368 aa10.47□□□□□ -0.73
ACTN1-212ENST00000554158 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
ACTN1-212ENST00000554158 CTSWP56202 376 aa10.46□□□□□ -0.73
ACTN1-212ENST00000554158 FBXO46Q6PJ61 603 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-212ENST00000554158 JARID2Q92833 1246 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-212ENST00000554158 GCC1Q96CN9 775 aa10.46□□□□□ -0.73
ACTN1-212ENST00000554158 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.73
ACTN1-212ENST00000554158 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-212ENST00000554158 IFT57Q9NWB7 429 aa10.46□□□□□ -0.73
ACTN1-212ENST00000554158 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
ACTN1-212ENST00000554158 GPR25O00155 361 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 FKTNO75072 461 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 CCT4P50991 539 aaKnown RBP10.45□□□□□ -0.74
ACTN1-212ENST00000554158 PRKG1Q13976 671 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 NBPF9Q3BBW0 867 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 STRIP1Q5VSL9 837 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 PRAMEF18Q5VWM3 479 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 MOB2Q70IA6 237 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 COA1Q9GZY4 146 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 BSDC1Q9NW68 430 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-212ENST00000554158 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 SCAF8Q9UPN6 1271 aaKnown RBP10.45□□□□□ -0.74
ACTN1-212ENST00000554158 MAP3K2Q9Y2U5 619 aa10.45□□□□□ -0.74
ACTN1-212ENST00000554158 MYO1BO43795 1136 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 SASH1O94885 1247 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 TM4SF4P48230 202 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
ACTN1-212ENST00000554158 TTLL5Q6EMB2 1281 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 OTUD7BQ6GQQ9 843 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 GMLQ99445 158 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 ANKRD2Q9GZV1 360 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 ANGEL1Q9UNK9 670 aaKnown RBP10.44□□□□□ -0.74
ACTN1-212ENST00000554158 LEMD3Q9Y2U8 911 aa10.44□□□□□ -0.74
ACTN1-212ENST00000554158 ZNF646O15015 1829 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-212ENST00000554158 WNT10BO00744 389 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-212ENST00000554158 INHBEP58166 350 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 DLGAP5Q15398 846 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 NOM1Q5C9Z4 860 aaKnown RBP10.43□□□□□ -0.74
ACTN1-212ENST00000554158 DACT2Q5SW24 774 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 KSR2Q6VAB6 950 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 MIER1Q8N108 512 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 MINPP1Q9UNW1 487 aa10.43□□□□□ -0.74
ACTN1-212ENST00000554158 COL1A1P02452 1464 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-212ENST00000554158 ZNF804BA4D1E1 1349 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 PI4KAP2A4QPH2 592 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 MANSC4A6NHS7 340 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-212ENST00000554158 APAF1O14727 1248 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 PI4KAP1Q8N8J0 262 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 SPRYD3Q8NCJ5 442 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 TTLL11Q8NHH1 800 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 MYH16Q9H6N6 1097 aa10.42□□□□□ -0.74
ACTN1-212ENST00000554158 GREM2Q9H772 168 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms