RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RDXP35241 583 aaKnown RBP11.01□□□□□ -0.65
SIX4-202ENST00000554079 RWDD2BP57060 319 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 CASP8Q14790 479 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 FAM173BQ6P4H8 233 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 NUTM1Q86Y26 1132 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 ZNF513Q8N8E2 541 aaPredicted RBP11.01□□□□□ -0.65
SIX4-202ENST00000554079 WDR24Q96S15 920 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
SIX4-202ENST00000554079 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
SIX4-202ENST00000554079 IL25Q9H293 177 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 ABCB6Q9NP58 842 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 POTEB2H3BUK9 544 aa11□□□□□ -0.65
SIX4-202ENST00000554079 APBB1O00213 710 aa11□□□□□ -0.65
SIX4-202ENST00000554079 EBAG9O00559 213 aa11□□□□□ -0.65
SIX4-202ENST00000554079 NRDCO43847 1150 aa11□□□□□ -0.65
SIX4-202ENST00000554079 DTNBO60941 627 aa11□□□□□ -0.65
SIX4-202ENST00000554079 RNF40O75150 1001 aa11□□□□□ -0.65
SIX4-202ENST00000554079 CAND2O75155 1236 aa11□□□□□ -0.65
SIX4-202ENST00000554079 AARSP49588 968 aaKnown RBP eCLIP11□□□□□ -0.65
SIX4-202ENST00000554079 TLDC1Q6P9B6 456 aa11□□□□□ -0.65
SIX4-202ENST00000554079 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
SIX4-202ENST00000554079 FCHSD1Q86WN1 690 aa11□□□□□ -0.65
SIX4-202ENST00000554079 AOPEPQ8N6M6 819 aa11□□□□□ -0.65
SIX4-202ENST00000554079 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
SIX4-202ENST00000554079 BICD2Q8TD16 824 aa11□□□□□ -0.65
SIX4-202ENST00000554079 SPATA32Q96LK8 384 aa11□□□□□ -0.65
SIX4-202ENST00000554079 IRAK4Q9NWZ3 460 aa11□□□□□ -0.65
SIX4-202ENST00000554079 CAPN7Q9Y6W3 813 aa11□□□□□ -0.65
SIX4-202ENST00000554079 ADGRB1O14514 1584 aa11□□□□□ -0.65
SIX4-202ENST00000554079 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
SIX4-202ENST00000554079 PHACTR2O75167 634 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 TRAF1Q13077 416 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 HSP90B2PQ58FF3 399 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 TSPYL6Q8N831 410 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 MICAL1Q8TDZ2 1067 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 ERCC4Q92889 916 aaPredicted RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 DHX58Q96C10 678 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 THOC1Q96FV9 657 aaKnown RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 XPO4Q9C0E2 1151 aaKnown RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 ACBD3Q9H3P7 528 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 SPATS2LQ9NUQ6 558 aaKnown RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 ABCC3O15438 1527 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 GOLGA6L4A6NEF3 574 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 ERLIN1O75477 346 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 SYF2O95926 243 aaKnown RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 CDCA2Q69YH5 1023 aaPredicted RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
SIX4-202ENST00000554079 HYPKQ9NX55 129 aa10.99□□□□□ -0.65
SIX4-202ENST00000554079 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
SIX4-202ENST00000554079 NSD2O96028 1365 aa10.98□□□□□ -0.65
SIX4-202ENST00000554079 LRRIQ3A6PVS8 624 aaPredicted RBP10.98□□□□□ -0.65
SIX4-202ENST00000554079 SNUPNO95149 360 aaKnown RBP10.98□□□□□ -0.65
SIX4-202ENST00000554079 ANKRD18AQ8IVF6 992 aa10.98□□□□□ -0.65
SIX4-202ENST00000554079 EVC2Q86UK5 1308 aa10.98□□□□□ -0.65
SIX4-202ENST00000554079 A0A087WWV3 80 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 AP1G2O75843 785 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
SIX4-202ENST00000554079 RPS6KA3P51812 740 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 CHMP4BP1P59074 171 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 TSHZ3Q63HK5 1081 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 SRGAP1Q7Z6B7 1085 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 FERMT3Q86UX7 667 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 CEP112Q8N8E3 955 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 ANO10Q9NW15 660 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 IFNKQ9P0W0 207 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
SIX4-202ENST00000554079 A0A1B0GUA9 196 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 KINO60870 393 aaKnown RBP10.97□□□□□ -0.65
SIX4-202ENST00000554079 CUTAO60888 179 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 CLNS1AP54105 237 aaKnown RBP10.97□□□□□ -0.65
SIX4-202ENST00000554079 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 MTA1Q13330 715 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 PARD3BQ8TEW8 1205 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 SH2B1Q9NRF2 756 aaPredicted RBP10.97□□□□□ -0.65
SIX4-202ENST00000554079 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
SIX4-202ENST00000554079 PPP2R2CQ9Y2T4 447 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 PREX2Q70Z35 1606 aa10.97□□□□□ -0.65
SIX4-202ENST00000554079 ZSCAN12O43309 604 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
SIX4-202ENST00000554079 GNG11P61952 73 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 VSNL1P62760 191 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 C1QTNF12Q5T7M4 302 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 TMEM139Q8IV31 216 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 ZSCAN31Q96LW9 406 aaPredicted RBP10.96□□□□□ -0.65
SIX4-202ENST00000554079 KAT14Q9H8E8 782 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 VIPAS39Q9H9C1 493 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 GRIN2DO15399 1336 aa10.96□□□□□ -0.65
SIX4-202ENST00000554079 IRAK1P51617 712 aa10.96□□□□□ -0.66
SIX4-202ENST00000554079 CCT2P78371 535 aaKnown RBP10.96□□□□□ -0.66
SIX4-202ENST00000554079 SKIDA1Q1XH10 827 aa10.96□□□□□ -0.66
SIX4-202ENST00000554079 TBC1D25Q3MII6 688 aa10.96□□□□□ -0.66
SIX4-202ENST00000554079 PAIP2Q9BPZ3 127 aaKnown RBP10.96□□□□□ -0.66
SIX4-202ENST00000554079 KIF9Q9HAQ2 790 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms