RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SRGAP3O43295 1099 aa29■■■□□ 2.23
NEK9-203ENST00000553945 SMC1BQ8NDV3 1235 aa29■■■□□ 2.23
NEK9-203ENST00000553945 IRS2Q9Y4H2 1338 aa28.99■■■□□ 2.23
NEK9-203ENST00000553945 ZBTB7BO15156 539 aaPredicted RBP28.99■■■□□ 2.23
NEK9-203ENST00000553945 POTEIP0CG38 1075 aa28.99■■■□□ 2.23
NEK9-203ENST00000553945 POTEJP0CG39 1038 aa28.99■■■□□ 2.23
NEK9-203ENST00000553945 FSTL1Q12841 308 aa28.99■■■□□ 2.23
NEK9-203ENST00000553945 UBE4AQ14139 1066 aa28.99■■■□□ 2.23
NEK9-203ENST00000553945 C15orf52Q6ZUT6 534 aaKnown RBP28.99■■■□□ 2.23
NEK9-203ENST00000553945 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.99■■■□□ 2.23
NEK9-203ENST00000553945 PA2G4Q9UQ80 394 aaKnown RBP28.99■■■□□ 2.23
NEK9-203ENST00000553945 PSME4Q14997 1843 aa28.99■■■□□ 2.23
NEK9-203ENST00000553945 VIL1P09327 827 aaKnown RBP28.98■■■□□ 2.23
NEK9-203ENST00000553945 MTX1Q13505 466 aa28.98■■■□□ 2.23
NEK9-203ENST00000553945 PNMA8AQ86V59 439 aaPredicted RBP28.98■■■□□ 2.23
NEK9-203ENST00000553945 FBXW7Q969H0 707 aa28.98■■■□□ 2.23
NEK9-203ENST00000553945 USP17L3A6NCW0 530 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 USP17L4A6NCW7 530 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 PDE8BO95263 885 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 USP17L1Q7RTZ2 530 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 ATG9AQ7Z3C6 839 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 C1orf115Q9H7X2 142 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 CNOT7Q9UIV1 285 aaKnown RBP28.97■■■□□ 2.23
NEK9-203ENST00000553945 CLEC11AQ9Y240 323 aa28.97■■■□□ 2.23
NEK9-203ENST00000553945 ZNF804AQ7Z570 1209 aa28.96■■■□□ 2.23
NEK9-203ENST00000553945 LDHDQ86WU2 507 aa28.96■■■□□ 2.23
NEK9-203ENST00000553945 VGLL2Q8N8G2 317 aa28.96■■■□□ 2.23
NEK9-203ENST00000553945 CD209Q9NNX6 404 aa28.96■■■□□ 2.23
NEK9-203ENST00000553945 COPRSQ9NQ92 184 aa28.96■■■□□ 2.23
NEK9-203ENST00000553945 ADARB2Q9NS39 739 aaKnown RBP28.96■■■□□ 2.23
NEK9-203ENST00000553945 FBXO3Q9UK99 471 aa28.96■■■□□ 2.23
NEK9-203ENST00000553945 CIAO1O76071 339 aa28.95■■■□□ 2.22
NEK9-203ENST00000553945 RPS12P25398 132 aaKnown RBP28.95■■■□□ 2.22
NEK9-203ENST00000553945 CHADLQ6NUI6 762 aa28.95■■■□□ 2.22
NEK9-203ENST00000553945 RSBN1LQ6PCB5 846 aaPredicted RBP28.95■■■□□ 2.22
NEK9-203ENST00000553945 DPF2Q92785 391 aa28.95■■■□□ 2.22
NEK9-203ENST00000553945 COG6Q9Y2V7 657 aa28.95■■■□□ 2.22
NEK9-203ENST00000553945 SHTN1A0MZ66 631 aa28.94■■■□□ 2.22
NEK9-203ENST00000553945 H7C1D1 291 aa28.94■■■□□ 2.22
NEK9-203ENST00000553945 MVPQ14764 893 aaKnown RBP28.94■■■□□ 2.22
NEK9-203ENST00000553945 MICALL2Q8IY33 904 aa28.94■■■□□ 2.22
NEK9-203ENST00000553945 PNMA6EA0A0J9YXQ4 647 aa28.93■■■□□ 2.22
NEK9-203ENST00000553945 USP50Q70EL3 339 aaPredicted RBP28.93■■■□□ 2.22
NEK9-203ENST00000553945 IL15P40933 162 aaPredicted RBP28.92■■■□□ 2.22
NEK9-203ENST00000553945 GYG1P46976 350 aa28.92■■■□□ 2.22
NEK9-203ENST00000553945 PUM3Q15397 648 aaKnown RBP28.92■■■□□ 2.22
NEK9-203ENST00000553945 ADAMTSL1Q8N6G6 1762 aa28.92■■■□□ 2.22
NEK9-203ENST00000553945 HIBADHP31937 336 aaKnown RBP28.91■■■□□ 2.22
NEK9-203ENST00000553945 GTF2IP78347 998 aa28.91■■■□□ 2.22
NEK9-203ENST00000553945 DACT2Q5SW24 774 aa28.91■■■□□ 2.22
NEK9-203ENST00000553945 STRIP1Q5VSL9 837 aa28.91■■■□□ 2.22
NEK9-203ENST00000553945 TTLL5Q6EMB2 1281 aa28.91■■■□□ 2.22
NEK9-203ENST00000553945 MXD3Q9BW11 206 aa28.91■■■□□ 2.22
NEK9-203ENST00000553945 CEP126Q9P2H0 1117 aa28.91■■■□□ 2.22
NEK9-203ENST00000553945 ZNF646O15015 1829 aaPredicted RBP28.91■■■□□ 2.22
NEK9-203ENST00000553945 PDE3AQ14432 1141 aa28.9■■■□□ 2.22
NEK9-203ENST00000553945 C20orf194Q5TEA3 1177 aa28.9■■■□□ 2.22
NEK9-203ENST00000553945 AGBL3Q8NEM8 1001 aa28.9■■■□□ 2.22
NEK9-203ENST00000553945 DDX19BQ9UMR2 479 aa28.9■■■□□ 2.22
NEK9-203ENST00000553945 IFIT1P09914 478 aaKnown RBP28.89■■■□□ 2.22
NEK9-203ENST00000553945 IL1R1P14778 569 aa28.89■■■□□ 2.22
NEK9-203ENST00000553945 HSPA6P17066 643 aa28.89■■■□□ 2.22
NEK9-203ENST00000553945 ATP8B2P98198 1209 aa28.89■■■□□ 2.22
NEK9-203ENST00000553945 FAM84BQ96KN1 310 aaPredicted RBP28.89■■■□□ 2.22
NEK9-203ENST00000553945 ZNF609O15014 1411 aa28.88■■■□□ 2.21
NEK9-203ENST00000553945 FGFR2P21802 821 aa28.88■■■□□ 2.21
NEK9-203ENST00000553945 CAVIN4Q5BKX8 364 aa28.88■■■□□ 2.21
NEK9-203ENST00000553945 VPS37DQ86XT2 251 aa28.88■■■□□ 2.21
NEK9-203ENST00000553945 TRPM4Q8TD43 1214 aa28.88■■■□□ 2.21
NEK9-203ENST00000553945 GMLQ99445 158 aa28.88■■■□□ 2.21
NEK9-203ENST00000553945 SLC5A1P13866 664 aa28.87■■■□□ 2.21
NEK9-203ENST00000553945 TBC1D10BQ4KMP7 808 aaPredicted RBP28.87■■■□□ 2.21
NEK9-203ENST00000553945 MAP1SQ66K74 1059 aaPredicted RBP28.87■■■□□ 2.21
NEK9-203ENST00000553945 SAMD7Q7Z3H4 446 aa28.87■■■□□ 2.21
NEK9-203ENST00000553945 LPIN2Q92539 896 aa28.87■■■□□ 2.21
NEK9-203ENST00000553945 RBM26Q5T8P6 1007 aaKnown RBP28.86■■■□□ 2.21
NEK9-203ENST00000553945 FBXO33Q7Z6M2 555 aa28.86■■■□□ 2.21
NEK9-203ENST00000553945 SSH3Q8TE77 659 aa28.86■■■□□ 2.21
NEK9-203ENST00000553945 MYO3BQ8WXR4 1341 aa28.86■■■□□ 2.21
NEK9-203ENST00000553945 USP17L8P0C7I0 530 aa28.85■■■□□ 2.21
NEK9-203ENST00000553945 HIRAP54198 1017 aaPredicted RBP28.85■■■□□ 2.21
NEK9-203ENST00000553945 POLA2Q14181 598 aa28.85■■■□□ 2.21
NEK9-203ENST00000553945 ATP2B3Q16720 1220 aa28.85■■■□□ 2.21
NEK9-203ENST00000553945 TDRD7Q8NHU6 1098 aaKnown RBP28.85■■■□□ 2.21
NEK9-203ENST00000553945 JAG2Q9Y219 1238 aa28.85■■■□□ 2.21
NEK9-203ENST00000553945 EGFRP00533 1210 aa28.84■■■□□ 2.21
NEK9-203ENST00000553945 G3BP1Q13283 466 aaKnown RBP eCLIP28.84■■■□□ 2.21
NEK9-203ENST00000553945 CEP85Q6P2H3 762 aa28.84■■■□□ 2.21
NEK9-203ENST00000553945 CHMP4BQ9H444 224 aaKnown RBP28.84■■■□□ 2.21
NEK9-203ENST00000553945 BCAMP50895 628 aa28.83■■■□□ 2.21
NEK9-203ENST00000553945 ZNF280AP59817 542 aaPredicted RBP28.83■■■□□ 2.21
NEK9-203ENST00000553945 TFCP2Q12800 502 aa28.83■■■□□ 2.21
NEK9-203ENST00000553945 CNTROBQ8N137 903 aa28.83■■■□□ 2.21
NEK9-203ENST00000553945 ZBTB40Q9NUA8 1239 aa28.83■■■□□ 2.21
NEK9-203ENST00000553945 IQSEC3Q9UPP2 1182 aaPredicted RBP28.83■■■□□ 2.21
NEK9-203ENST00000553945 FRAT2O75474 233 aaPredicted RBP28.82■■■□□ 2.2
NEK9-203ENST00000553945 SASH1O94885 1247 aa28.82■■■□□ 2.2
NEK9-203ENST00000553945 KIF4BQ2VIQ3 1234 aa28.81■■■□□ 2.2
NEK9-203ENST00000553945 KIAA0825Q8IV33 1275 aa28.81■■■□□ 2.2
NEK9-203ENST00000553945 FAM205AQ6ZU69 1335 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms