RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 NFKBIEO00221 500 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-209ENST00000553855 ANKRD18AQ8IVF6 992 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 MPNDQ8N594 471 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-209ENST00000553855 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 ATP6V0A2Q9Y487 856 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 KIF16BQ96L93 1317 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 ARFGEF1Q9Y6D6 1849 aa10.51□□□□□ -0.73
PSEN1-209ENST00000553855 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-209ENST00000553855 H7C1W4 665 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 IGHMBP2P38935 993 aaKnown RBP10.5□□□□□ -0.73
PSEN1-209ENST00000553855 CTSWP56202 376 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 RPS8P62241 208 aaKnown RBP10.5□□□□□ -0.73
PSEN1-209ENST00000553855 BEND3Q5T5X7 828 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 PARP9Q8IXQ6 854 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-209ENST00000553855 C7orf43Q8WVR3 580 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 CCDC85AQ96PX6 553 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-209ENST00000553855 PSMD1Q99460 953 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 CHMP3Q9Y3E7 222 aa10.5□□□□□ -0.73
PSEN1-209ENST00000553855 BRCA1P38398 1863 aaKnown RBP10.5□□□□□ -0.73
PSEN1-209ENST00000553855 UTRNP46939 3433 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 GRM8O00222 908 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 EVI5O60447 810 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 FECHP22830 423 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 CCT4P50991 539 aaKnown RBP10.49□□□□□ -0.73
PSEN1-209ENST00000553855 RARSP54136 660 aaKnown RBP10.49□□□□□ -0.73
PSEN1-209ENST00000553855 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 LARGE2Q8N3Y3 721 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 ZMYND15Q9H091 742 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 VPS33BQ9H267 617 aa10.49□□□□□ -0.73
PSEN1-209ENST00000553855 ZNF277Q9NRM2 450 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-209ENST00000553855 NOB1Q9ULX3 412 aaKnown RBP10.49□□□□□ -0.73
PSEN1-209ENST00000553855 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
PSEN1-209ENST00000553855 CACNA1FO60840 1977 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 ANKRD18BA2A2Z9 1011 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
PSEN1-209ENST00000553855 EIF6P56537 245 aaKnown RBP10.48□□□□□ -0.73
PSEN1-209ENST00000553855 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 FRAT1Q92837 279 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-209ENST00000553855 EYA3Q99504 573 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 MPHOSPH8Q99549 860 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 PLA2G12BQ9BX93 195 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 ANKIB1Q9P2G1 1089 aa10.48□□□□□ -0.73
PSEN1-209ENST00000553855 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
PSEN1-209ENST00000553855 C6orf229H3BNL8 230 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 IFIT5Q13325 482 aaKnown RBP10.47□□□□□ -0.73
PSEN1-209ENST00000553855 CCDC57Q2TAC2 916 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 OLFM4Q6UX06 510 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 ARHGAP45Q92619 1136 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 CELF1Q92879 486 aaKnown RBP10.47□□□□□ -0.73
PSEN1-209ENST00000553855 SLX4Q8IY92 1834 aa10.47□□□□□ -0.73
PSEN1-209ENST00000553855 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
PSEN1-209ENST00000553855 PTGDRQ13258 359 aa10.46□□□□□ -0.73
PSEN1-209ENST00000553855 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
PSEN1-209ENST00000553855 GREM2Q9H772 168 aa10.46□□□□□ -0.73
PSEN1-209ENST00000553855 SEC31BQ9NQW1 1179 aa10.46□□□□□ -0.73
PSEN1-209ENST00000553855 UBTFL1P0CB47 393 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-209ENST00000553855 ITGA6P23229 1130 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 KCNJ4P48050 445 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 WASHC4Q2M389 1173 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 ZKSCAN2Q63HK3 967 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 FTSJ3Q8IY81 847 aaKnown RBP10.45□□□□□ -0.74
PSEN1-209ENST00000553855 ZC3H12CQ9C0D7 883 aaKnown RBP10.45□□□□□ -0.74
PSEN1-209ENST00000553855 ANKRD2Q9GZV1 360 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 BSDC1Q9NW68 430 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-209ENST00000553855 GGA1Q9UJY5 639 aa10.45□□□□□ -0.74
PSEN1-209ENST00000553855 CACNA1SQ13698 1873 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 RTL9Q8NET4 1388 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 XDHP47989 1333 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 IQCA1LA6NCM1 817 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 CSF1RP07333 972 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 MS4A1P11836 297 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-209ENST00000553855 ATP2B4P23634 1241 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 CASP7P55210 303 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 AOC3Q16853 763 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 FAM161AQ3B820 660 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
PSEN1-209ENST00000553855 RTFDC1Q9BY42 306 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-209ENST00000553855 RRAGCQ9HB90 399 aa10.44□□□□□ -0.74
PSEN1-209ENST00000553855 BCAR3O75815 825 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 UFL1O94874 794 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 GNAI3P08754 354 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 LMOD1P29536 600 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-209ENST00000553855 GPSM2P81274 684 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 KIAA2012Q0VF49 1180 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-209ENST00000553855 CNNM1Q9NRU3 951 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
PSEN1-209ENST00000553855 DDX60Q8IY21 1712 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms