RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 GREM2Q9H772 168 aa12.65□□□□□ -0.38
ACTN1-210ENST00000553779 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
ACTN1-210ENST00000553779 MYO3BQ8WXR4 1341 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 ZNF609O15014 1411 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 NEURL1BA8MQ27 555 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 TRPA1O75762 1119 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
ACTN1-210ENST00000553779 ZNF280AP59817 542 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-210ENST00000553779 ZIC5Q96T25 663 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 BSDC1Q9NW68 430 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-210ENST00000553779 SAGE1Q9NXZ1 904 aa12.64□□□□□ -0.39
ACTN1-210ENST00000553779 PITPNM2Q9BZ72 1349 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 SLC10A3P09131 477 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 ANKRD2Q9GZV1 360 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 MRS2Q9HD23 443 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
ACTN1-210ENST00000553779 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-210ENST00000553779 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-210ENST00000553779 ITGA6P23229 1130 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 FKBP1BP68106 108 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 FLIIQ13045 1269 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 TAF7LQ5H9L4 462 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-210ENST00000553779 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 SCAF8Q9UPN6 1271 aaKnown RBP12.62□□□□□ -0.39
ACTN1-210ENST00000553779 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
ACTN1-210ENST00000553779 SASH1O94885 1247 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 GCKRQ14397 625 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 RASAL3Q86YV0 1011 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-210ENST00000553779 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 IL16Q14005 1332 aa12.61□□□□□ -0.39
ACTN1-210ENST00000553779 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 ANP32CO43423 234 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 STRIP1Q5VSL9 837 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 G2E3Q7L622 706 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
ACTN1-210ENST00000553779 MXD3Q9BW11 206 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
ACTN1-210ENST00000553779 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-210ENST00000553779 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 GTF2IP78347 998 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
ACTN1-210ENST00000553779 PRKG1Q13976 671 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 DACT2Q5SW24 774 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 PRAMEF18Q5VWM3 479 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 GMLQ99445 158 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
ACTN1-210ENST00000553779 H7C1W4 665 aa12.58□□□□□ -0.4
ACTN1-210ENST00000553779 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
ACTN1-210ENST00000553779 MOB2Q70IA6 237 aa12.58□□□□□ -0.4
ACTN1-210ENST00000553779 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
ACTN1-210ENST00000553779 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
ACTN1-210ENST00000553779 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-210ENST00000553779 WNT10BO00744 389 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 MYO1BO43795 1136 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 MMP14P50281 582 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 CHRNDQ07001 517 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 SREBF2Q12772 1141 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 DLGAP5Q15398 846 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
ACTN1-210ENST00000553779 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
ACTN1-210ENST00000553779 F8W031 263 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-210ENST00000553779 PLIN1O60240 522 aa12.56□□□□□ -0.4
ACTN1-210ENST00000553779 KLRK1P26718 216 aa12.56□□□□□ -0.4
ACTN1-210ENST00000553779 RBM5P52756 815 aaKnown RBP eCLIP12.56□□□□□ -0.4
ACTN1-210ENST00000553779 SOX10P56693 466 aa12.56□□□□□ -0.4
ACTN1-210ENST00000553779 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
ACTN1-210ENST00000553779 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
ACTN1-210ENST00000553779 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
ACTN1-210ENST00000553779 CNNM1Q9NRU3 951 aa12.56□□□□□ -0.4
ACTN1-210ENST00000553779 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-210ENST00000553779 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-210ENST00000553779 TAF5LO75529 589 aa12.55□□□□□ -0.4
ACTN1-210ENST00000553779 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
ACTN1-210ENST00000553779 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-210ENST00000553779 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
ACTN1-210ENST00000553779 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
ACTN1-210ENST00000553779 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
ACTN1-210ENST00000553779 F6X3S4 739 aa12.54□□□□□ -0.4
ACTN1-210ENST00000553779 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
ACTN1-210ENST00000553779 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
ACTN1-210ENST00000553779 CD209Q9NNX6 404 aa12.54□□□□□ -0.4
ACTN1-210ENST00000553779 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms