RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TLR7Q9NYK1 1049 aaKnown RBP5.85□□□□□ -1.47
TDP1-207ENST00000553617 KHNYNO15037 678 aaKnown RBP5.84□□□□□ -1.47
TDP1-207ENST00000553617 STK10O94804 968 aaKnown RBP5.84□□□□□ -1.47
TDP1-207ENST00000553617 MAPTP10636 758 aaKnown RBP5.84□□□□□ -1.47
TDP1-207ENST00000553617 ACPPP15309 386 aa5.84□□□□□ -1.47
TDP1-207ENST00000553617 NFKB1P19838 968 aa5.84□□□□□ -1.47
TDP1-207ENST00000553617 GARTP22102 1010 aa5.84□□□□□ -1.47
TDP1-207ENST00000553617 ITPKAP23677 461 aa5.84□□□□□ -1.47
TDP1-207ENST00000553617 EIF4A3P38919 411 aaKnown RBP5.84□□□□□ -1.47
TDP1-207ENST00000553617 CEP120Q8N960 986 aa5.84□□□□□ -1.47
TDP1-207ENST00000553617 EAF1Q96JC9 268 aaPredicted RBP5.84□□□□□ -1.47
TDP1-207ENST00000553617 PIF1Q9H611 641 aa5.84□□□□□ -1.47
TDP1-207ENST00000553617 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
TDP1-207ENST00000553617 SLC35F4A4IF30 521 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 NFKBIEO00221 500 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 BNIP3LO60238 219 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 FBXO24O75426 580 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 RLBP1P12271 317 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 GRIA4P48058 902 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 SPEM2Q0P670 501 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 HYAL2Q12891 473 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 DTHD1Q6ZMT9 781 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 RELL1Q8IUW5 271 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 PHC3Q8NDX5 983 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 PMFBP1Q8TBY8 1022 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 OSMRQ99650 979 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 BHLHE41Q9C0J9 482 aaPredicted RBP5.83□□□□□ -1.48
TDP1-207ENST00000553617 NUCKS1Q9H1E3 243 aaKnown RBP5.83□□□□□ -1.48
TDP1-207ENST00000553617 OSBPL2Q9H1P3 480 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 DZANK1Q9NVP4 752 aa5.83□□□□□ -1.48
TDP1-207ENST00000553617 TLDC2A0PJX2 215 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 F6X3S4 739 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 GREM1O60565 184 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 PSAPP07602 524 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 GBP2P32456 591 aaPredicted RBP5.82□□□□□ -1.48
TDP1-207ENST00000553617 SOX9P48436 509 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 PLAURQ03405 335 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 SERINC3Q13530 473 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 FBXL19Q6PCT2 694 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 SLC30A3Q99726 388 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 NT5C1AQ9BXI3 368 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 ZFYVE1Q9HBF4 777 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 MARK1Q9P0L2 795 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 AKAP2Q9Y2D5 859 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 TBX22Q9Y458 520 aa5.82□□□□□ -1.48
TDP1-207ENST00000553617 MINDY4BA8MYZ0 360 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 ENC1O14682 589 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 CELA3AP09093 270 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 LIG3P49916 1009 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 NRLP54845 237 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 PTSQ03393 145 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 DBN1Q16643 649 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 TPTE2Q6XPS3 522 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 RIPOR1Q6ZS17 1223 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 DHX32Q7L7V1 743 aaKnown RBP5.81□□□□□ -1.48
TDP1-207ENST00000553617 NCAPG2Q86XI2 1143 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 TRIM22Q8IYM9 498 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 TMEM102Q8N9M5 508 aaPredicted RBP5.81□□□□□ -1.48
TDP1-207ENST00000553617 ZNF296Q8WUU4 475 aaPredicted RBP5.81□□□□□ -1.48
TDP1-207ENST00000553617 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 NECAB3Q96P71 396 aaPredicted RBP5.81□□□□□ -1.48
TDP1-207ENST00000553617 PNMA5Q96PV4 448 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 CEP44Q9C0F1 390 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 GINM1Q9NU53 330 aa5.81□□□□□ -1.48
TDP1-207ENST00000553617 TMA7Q9Y2S6 64 aaKnown RBP5.81□□□□□ -1.48
TDP1-207ENST00000553617 H7C1W4 665 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 MAN1A2O60476 641 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 TRPA1O75762 1119 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 NASPP49321 788 aaPredicted RBP5.8□□□□□ -1.48
TDP1-207ENST00000553617 GPLD1P80108 840 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 LMNB2Q03252 620 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 COL9A2Q14055 689 aaPredicted RBP5.8□□□□□ -1.48
TDP1-207ENST00000553617 SPRED3Q2MJR0 410 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 RPS26P11Q5JNZ5 115 aaPredicted RBP5.8□□□□□ -1.48
TDP1-207ENST00000553617 FAM182BQ5T319 152 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 ZNF746Q6NUN9 644 aaPredicted RBP5.8□□□□□ -1.48
TDP1-207ENST00000553617 AGMOQ6ZNB7 445 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 TRPM4Q8TD43 1214 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 SLC16A10Q8TF71 515 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 BHMTQ93088 406 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 NXPE3Q969Y0 559 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 ABHD17AQ96GS6 310 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 HHIPQ96QV1 700 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 ZNF576Q9H609 170 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 ZSWIM4Q9H7M6 989 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 ZNF408Q9H9D4 720 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 NXF1Q9UBU9 619 aaKnown RBP5.8□□□□□ -1.48
TDP1-207ENST00000553617 STRIP2Q9ULQ0 834 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
TDP1-207ENST00000553617 SUPT16HQ9Y5B9 1047 aaKnown RBP5.8□□□□□ -1.48
TDP1-207ENST00000553617 METTL12A8MUP2 240 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 ZBTB42B2RXF5 422 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 PF4P02776 101 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 CD33P20138 364 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 RPS26P62854 115 aaKnown RBP5.79□□□□□ -1.48
TDP1-207ENST00000553617 FAAP100Q0VG06 881 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 MAP3K11Q16584 847 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 RAB44Q7Z6P3 723 aaPredicted RBP5.79□□□□□ -1.48
TDP1-207ENST00000553617 NPAS3Q8IXF0 933 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms