RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 SHISA2Q6UWI4 295 aa12.19□□□□□ -0.46
PCNX1-205ENST00000553508 ILDR2Q71H61 639 aa12.19□□□□□ -0.46
PCNX1-205ENST00000553508 SH2B1Q9NRF2 756 aaPredicted RBP12.19□□□□□ -0.46
PCNX1-205ENST00000553508 DCTN4Q9UJW0 460 aa12.19□□□□□ -0.46
PCNX1-205ENST00000553508 LINC01387J3KSC0 135 aa12.18□□□□□ -0.46
PCNX1-205ENST00000553508 GPR182O15218 404 aa12.18□□□□□ -0.46
PCNX1-205ENST00000553508 EDN3P14138 238 aa12.18□□□□□ -0.46
PCNX1-205ENST00000553508 CDC27P30260 824 aa12.18□□□□□ -0.46
PCNX1-205ENST00000553508 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
PCNX1-205ENST00000553508 NFKBIEO00221 500 aa12.17□□□□□ -0.46
PCNX1-205ENST00000553508 PDE2AO00408 941 aaPredicted RBP12.17□□□□□ -0.46
PCNX1-205ENST00000553508 MSTNO14793 375 aa12.17□□□□□ -0.46
PCNX1-205ENST00000553508 NEFLP07196 543 aa12.17□□□□□ -0.46
PCNX1-205ENST00000553508 ELNP15502 786 aa12.17□□□□□ -0.46
PCNX1-205ENST00000553508 RBCK1Q9BYM8 510 aa12.17□□□□□ -0.46
PCNX1-205ENST00000553508 PPME1Q9Y570 386 aa12.17□□□□□ -0.46
PCNX1-205ENST00000553508 FAM177BA6PVY3 158 aa12.16□□□□□ -0.46
PCNX1-205ENST00000553508 DEAF1O75398 565 aaPredicted RBP12.16□□□□□ -0.46
PCNX1-205ENST00000553508 PTPRAP18433 802 aa12.16□□□□□ -0.46
PCNX1-205ENST00000553508 FBXO11Q86XK2 927 aa12.16□□□□□ -0.46
PCNX1-205ENST00000553508 DTWD1Q8N5C7 304 aa12.16□□□□□ -0.46
PCNX1-205ENST00000553508 SPOCK3Q9BQ16 436 aa12.16□□□□□ -0.46
PCNX1-205ENST00000553508 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
PCNX1-205ENST00000553508 SELPP16109 830 aa12.15□□□□□ -0.46
PCNX1-205ENST00000553508 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
PCNX1-205ENST00000553508 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
PCNX1-205ENST00000553508 IGHA2P01877 340 aa12.14□□□□□ -0.47
PCNX1-205ENST00000553508 EPHA1P21709 976 aa12.14□□□□□ -0.47
PCNX1-205ENST00000553508 PEAR1Q5VY43 1037 aaPredicted RBP12.14□□□□□ -0.47
PCNX1-205ENST00000553508 CACTIN-AS1Q8N1I8 211 aa12.14□□□□□ -0.47
PCNX1-205ENST00000553508 DMRTB1Q96MA1 342 aa12.14□□□□□ -0.47
PCNX1-205ENST00000553508 USP21Q9UK80 565 aa12.14□□□□□ -0.47
PCNX1-205ENST00000553508 CPNE3O75131 537 aaKnown RBP12.13□□□□□ -0.47
PCNX1-205ENST00000553508 SETDB1Q15047 1291 aa12.13□□□□□ -0.47
PCNX1-205ENST00000553508 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
PCNX1-205ENST00000553508 NXPE3Q969Y0 559 aa12.13□□□□□ -0.47
PCNX1-205ENST00000553508 C9orf172C9J069 976 aa12.12□□□□□ -0.47
PCNX1-205ENST00000553508 IGHA1P01876 353 aa12.12□□□□□ -0.47
PCNX1-205ENST00000553508 PROCP04070 461 aa12.12□□□□□ -0.47
PCNX1-205ENST00000553508 GALNT12Q8IXK2 581 aa12.12□□□□□ -0.47
PCNX1-205ENST00000553508 TMEM102Q8N9M5 508 aaPredicted RBP12.12□□□□□ -0.47
PCNX1-205ENST00000553508 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
PCNX1-205ENST00000553508 MUC3BQ9H195 1237 aa12.12□□□□□ -0.47
PCNX1-205ENST00000553508 EIF1AYO14602 144 aaKnown RBP12.11□□□□□ -0.47
PCNX1-205ENST00000553508 ADAM19Q9H013 955 aa12.11□□□□□ -0.47
PCNX1-205ENST00000553508 GATA4P43694 442 aa12.1□□□□□ -0.47
PCNX1-205ENST00000553508 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
PCNX1-205ENST00000553508 A0A1W2PP55 124 aa12.09□□□□□ -0.47
PCNX1-205ENST00000553508 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
PCNX1-205ENST00000553508 CABP4P57796 275 aa12.09□□□□□ -0.47
PCNX1-205ENST00000553508 GALNT11Q8NCW6 608 aa12.09□□□□□ -0.47
PCNX1-205ENST00000553508 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
PCNX1-205ENST00000553508 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
PCNX1-205ENST00000553508 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
PCNX1-205ENST00000553508 DLL1O00548 723 aa12.08□□□□□ -0.48
PCNX1-205ENST00000553508 SLC7A3Q8WY07 619 aa12.08□□□□□ -0.48
PCNX1-205ENST00000553508 CCDC74AQ96AQ1 378 aa12.08□□□□□ -0.48
PCNX1-205ENST00000553508 FSCN2O14926 492 aa12.07□□□□□ -0.48
PCNX1-205ENST00000553508 PLCB3Q01970 1234 aa12.07□□□□□ -0.48
PCNX1-205ENST00000553508 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
PCNX1-205ENST00000553508 ALKBH8Q96BT7 664 aaKnown RBP12.07□□□□□ -0.48
PCNX1-205ENST00000553508 LIN7BQ9HAP6 207 aa12.07□□□□□ -0.48
PCNX1-205ENST00000553508 H3BRJ5 948 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 NRG1Q02297 640 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-205ENST00000553508 DOC2BQ14184 412 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 MAP4K3Q8IVH8 894 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 BSNDQ8WZ55 320 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 DNAJC25Q9H1X3 360 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 EHD4Q9H223 541 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 SOX13Q9UN79 622 aa12.06□□□□□ -0.48
PCNX1-205ENST00000553508 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
PCNX1-205ENST00000553508 ADGRE1Q14246 886 aa12.05□□□□□ -0.48
PCNX1-205ENST00000553508 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
PCNX1-205ENST00000553508 SRA1Q9HD15 236 aaKnown RBP12.05□□□□□ -0.48
PCNX1-205ENST00000553508 SPRED3Q2MJR0 410 aa12.04□□□□□ -0.48
PCNX1-205ENST00000553508 HGSNATQ68CP4 663 aa12.04□□□□□ -0.48
PCNX1-205ENST00000553508 EPS8L3Q8TE67 593 aaKnown RBP12.04□□□□□ -0.48
PCNX1-205ENST00000553508 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
PCNX1-205ENST00000553508 BHLHE41Q9C0J9 482 aaPredicted RBP12.04□□□□□ -0.48
PCNX1-205ENST00000553508 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
PCNX1-205ENST00000553508 DDX3YO15523 660 aaKnown RBP12.03□□□□□ -0.48
PCNX1-205ENST00000553508 TREHO43280 583 aa12.03□□□□□ -0.48
PCNX1-205ENST00000553508 CD68P34810 354 aaPredicted RBP12.03□□□□□ -0.48
PCNX1-205ENST00000553508 MAPK8P45983 427 aa12.03□□□□□ -0.48
PCNX1-205ENST00000553508 DSC3Q14574 896 aa12.03□□□□□ -0.48
PCNX1-205ENST00000553508 TCF12Q99081 682 aa12.03□□□□□ -0.48
PCNX1-205ENST00000553508 KCNK4Q9NYG8 393 aa12.03□□□□□ -0.48
PCNX1-205ENST00000553508 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 ALX3O95076 343 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 GRIA4P48058 902 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 IREB2P48200 963 aaKnown RBP12.02□□□□□ -0.49
PCNX1-205ENST00000553508 FOXD4L6Q3SYB3 417 aaPredicted RBP12.02□□□□□ -0.49
PCNX1-205ENST00000553508 KIAA0319Q5VV43 1072 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 FOXD4L3Q6VB84 417 aaPredicted RBP12.02□□□□□ -0.49
PCNX1-205ENST00000553508 VN1R5Q7Z5H4 357 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 CCNJLQ8IV13 435 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 ASB16Q96NS5 453 aa12.02□□□□□ -0.49
PCNX1-205ENST00000553508 A0A096LPE4 126 aa12.01□□□□□ -0.49
PCNX1-205ENST00000553508 A0A1W2PPZ6 126 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms