RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SETDB2Q96T68 719 aa9.83□□□□□ -0.84
ATXN3-219ENST00000553488 ZNF330Q9Y3S2 320 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-219ENST00000553488 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-219ENST00000553488 KDM3BQ7LBC6 1761 aa9.83□□□□□ -0.84
ATXN3-219ENST00000553488 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 GNAT3A8MTJ3 354 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 PER1O15534 1290 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-219ENST00000553488 KCNQ3O43525 872 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATXN3-219ENST00000553488 TEFQ10587 303 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 MSS51Q4VC12 460 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 OLFM4Q6UX06 510 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 DZIP3Q86Y13 1208 aaKnown RBP9.82□□□□□ -0.84
ATXN3-219ENST00000553488 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 FMNL2Q96PY5 1086 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
ATXN3-219ENST00000553488 NPC1L1Q9UHC9 1359 aa9.81□□□□□ -0.84
ATXN3-219ENST00000553488 PPEF1O14829 653 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-219ENST00000553488 HSPA8P11142 646 aaKnown RBP9.81□□□□□ -0.84
ATXN3-219ENST00000553488 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-219ENST00000553488 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
ATXN3-219ENST00000553488 Q3C1V9 767 aa9.81□□□□□ -0.84
ATXN3-219ENST00000553488 ZNF277Q9NRM2 450 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-219ENST00000553488 RNF123Q5XPI4 1314 aa9.81□□□□□ -0.84
ATXN3-219ENST00000553488 PDE4DIPQ5VU43 2346 aa9.81□□□□□ -0.84
ATXN3-219ENST00000553488 ABCC12Q96J65 1359 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 FZD9O00144 591 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 NPR1P16066 1061 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 EPHX2P34913 555 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 LBX1P52954 281 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 NBPF5PQ86XG9 351 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-219ENST00000553488 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 AIDAQ96BJ3 306 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 HACL1Q9UJ83 578 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 RIC1Q4ADV7 1423 aa9.8□□□□□ -0.84
ATXN3-219ENST00000553488 NPHP1O15259 732 aa9.79□□□□□ -0.84
ATXN3-219ENST00000553488 EAPPQ56P03 285 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-219ENST00000553488 MAP1SQ66K74 1059 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-219ENST00000553488 USP16Q9Y5T5 823 aa9.79□□□□□ -0.84
ATXN3-219ENST00000553488 LAMB2P55268 1798 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 CASP8AP2Q9UKL3 1982 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 MOXD2PA6NHM9 499 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 GJA5P36382 358 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
ATXN3-219ENST00000553488 MMP16P51512 607 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 CC2D1BQ5T0F9 858 aaKnown RBP9.78□□□□□ -0.84
ATXN3-219ENST00000553488 NBPF10Q6P3W6 841 aaKnown RBP9.78□□□□□ -0.84
ATXN3-219ENST00000553488 GPC2Q8N158 579 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 NBPF15Q8N660 670 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 ABHD8Q96I13 439 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 PHACTR3Q96KR7 559 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 RSPH6AQ9H0K4 717 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 PRDM9Q9NQV7 894 aa9.78□□□□□ -0.84
ATXN3-219ENST00000553488 WDR33Q9C0J8 1336 aaKnown RBP9.78□□□□□ -0.84
ATXN3-219ENST00000553488 BTBD11A6QL63 1104 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 U2SURPO15042 1029 aaKnown RBP9.77□□□□□ -0.85
ATXN3-219ENST00000553488 DEFB115Q30KQ5 88 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 CRY2Q49AN0 593 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 PNMA8AQ86V59 439 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-219ENST00000553488 RTKN2Q8IZC4 609 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 CNTROBQ8N137 903 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 PSMD1Q99460 953 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
ATXN3-219ENST00000553488 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 ZNF652Q9Y2D9 606 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 ANKRD36CQ5JPF3 1778 aa9.77□□□□□ -0.85
ATXN3-219ENST00000553488 IBTKQ9P2D0 1353 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-219ENST00000553488 FDX1P10109 184 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 NDUFV2P19404 249 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 PRKAR2BP31323 418 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 SCNN1DP51172 638 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 LIAT1Q6ZQX7 453 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 NPM2Q86SE8 214 aaKnown RBP9.76□□□□□ -0.85
ATXN3-219ENST00000553488 SLC51AQ86UW1 340 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
ATXN3-219ENST00000553488 DDX21Q9NR30 783 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATXN3-219ENST00000553488 NIP7Q9Y221 180 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATXN3-219ENST00000553488 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
ATXN3-219ENST00000553488 MAP2K1Q02750 393 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-219ENST00000553488 FMR1Q06787 632 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATXN3-219ENST00000553488 DIXDC1Q155Q3 683 aa9.75□□□□□ -0.85
ATXN3-219ENST00000553488 HLFQ16534 295 aa9.75□□□□□ -0.85
ATXN3-219ENST00000553488 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
ATXN3-219ENST00000553488 LRRC37AA6NMS7 1700 aa9.74□□□□□ -0.85
ATXN3-219ENST00000553488 DXOO77932 396 aaKnown RBP9.74□□□□□ -0.85
ATXN3-219ENST00000553488 ALDH1B1P30837 517 aa9.74□□□□□ -0.85
ATXN3-219ENST00000553488 MCM10Q7L590 875 aa9.74□□□□□ -0.85
ATXN3-219ENST00000553488 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
ATXN3-219ENST00000553488 CAPNS2Q96L46 248 aa9.74□□□□□ -0.85
ATXN3-219ENST00000553488 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
ATXN3-219ENST00000553488 ABT1Q9ULW3 272 aaKnown RBP9.74□□□□□ -0.85
ATXN3-219ENST00000553488 TAF1P21675 1872 aa9.73□□□□□ -0.85
ATXN3-219ENST00000553488 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
ATXN3-219ENST00000553488 SPTLC1O15269 473 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms