RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
IFT43-205ENST00000553438 WNT10BO00744 389 aa13.17□□□□□ -0.3
IFT43-205ENST00000553438 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
IFT43-205ENST00000553438 NF2P35240 595 aa13.17□□□□□ -0.3
IFT43-205ENST00000553438 CTSWP56202 376 aa13.17□□□□□ -0.3
IFT43-205ENST00000553438 MKRN3Q13064 507 aaKnown RBP13.17□□□□□ -0.3
IFT43-205ENST00000553438 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
IFT43-205ENST00000553438 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
IFT43-205ENST00000553438 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
IFT43-205ENST00000553438 MYO3BQ8WXR4 1341 aa13.16□□□□□ -0.3
IFT43-205ENST00000553438 GNAI1P63096 354 aa13.16□□□□□ -0.3
IFT43-205ENST00000553438 SREBF2Q12772 1141 aa13.16□□□□□ -0.3
IFT43-205ENST00000553438 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
IFT43-205ENST00000553438 FBXO46Q6PJ61 603 aaPredicted RBP13.16□□□□□ -0.3
IFT43-205ENST00000553438 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
IFT43-205ENST00000553438 MINPP1Q9UNW1 487 aa13.16□□□□□ -0.3
IFT43-205ENST00000553438 FKTNO75072 461 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 SASH1O94885 1247 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
IFT43-205ENST00000553438 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
IFT43-205ENST00000553438 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 TTLL11Q8NHH1 800 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 GREM2Q9H772 168 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
IFT43-205ENST00000553438 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
IFT43-205ENST00000553438 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
IFT43-205ENST00000553438 PRKG1Q13976 671 aa13.14□□□□□ -0.31
IFT43-205ENST00000553438 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
IFT43-205ENST00000553438 CFHR5Q9BXR6 569 aa13.14□□□□□ -0.31
IFT43-205ENST00000553438 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
IFT43-205ENST00000553438 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 APAF1O14727 1248 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 MMP14P50281 582 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
IFT43-205ENST00000553438 LDLRAD1Q5T700 205 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 TXNRD3Q86VQ6 643 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 APOBEC3FQ8IUX4 373 aaKnown RBP13.13□□□□□ -0.31
IFT43-205ENST00000553438 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
IFT43-205ENST00000553438 KLRK1P26718 216 aa13.12□□□□□ -0.31
IFT43-205ENST00000553438 SPRYD7Q5W111 196 aa13.12□□□□□ -0.31
IFT43-205ENST00000553438 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
IFT43-205ENST00000553438 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
IFT43-205ENST00000553438 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
IFT43-205ENST00000553438 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
IFT43-205ENST00000553438 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
IFT43-205ENST00000553438 ZNF646O15015 1829 aaPredicted RBP13.11□□□□□ -0.31
IFT43-205ENST00000553438 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
IFT43-205ENST00000553438 IGHMBP2P38935 993 aaKnown RBP13.11□□□□□ -0.31
IFT43-205ENST00000553438 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
IFT43-205ENST00000553438 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
IFT43-205ENST00000553438 TSPYL6Q8N831 410 aa13.11□□□□□ -0.31
IFT43-205ENST00000553438 ZBED3Q96IU2 234 aaPredicted RBP13.11□□□□□ -0.31
IFT43-205ENST00000553438 MANSC4A6NHS7 340 aaPredicted RBP13.1□□□□□ -0.31
IFT43-205ENST00000553438 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 GTF2IP78347 998 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 TRIM17Q9Y577 477 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 SPEF2Q9C093 1822 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 HTTP42858 3142 aa13.1□□□□□ -0.31
IFT43-205ENST00000553438 COL1A1P02452 1464 aaPredicted RBP13.1□□□□□ -0.31
IFT43-205ENST00000553438 MYH3P11055 1940 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 H7C1W4 665 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 ITGA6P23229 1130 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 INHBEP58166 350 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 GCC1Q96CN9 775 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
IFT43-205ENST00000553438 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.09□□□□□ -0.31
IFT43-205ENST00000553438 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.31
IFT43-205ENST00000553438 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
IFT43-205ENST00000553438 KCNJ4P48050 445 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 PLA2G12BQ9BX93 195 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 STK31Q9BXU1 1019 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 CD209Q9NNX6 404 aa13.08□□□□□ -0.32
IFT43-205ENST00000553438 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
IFT43-205ENST00000553438 PPP1R12BO60237 982 aaPredicted RBP13.07□□□□□ -0.32
IFT43-205ENST00000553438 ZBTB48P10074 688 aaPredicted RBP13.07□□□□□ -0.32
IFT43-205ENST00000553438 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
IFT43-205ENST00000553438 WNK4Q96J92 1243 aa13.07□□□□□ -0.32
IFT43-205ENST00000553438 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
IFT43-205ENST00000553438 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
IFT43-205ENST00000553438 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 CSF1RP07333 972 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 CHRNDQ07001 517 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 GCKRQ14397 625 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 INTS3Q68E01 1043 aaKnown RBP13.06□□□□□ -0.32
IFT43-205ENST00000553438 G2E3Q7L622 706 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 MTMR14Q8NCE2 650 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms