RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SMC1BQ8NDV3 1235 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 KLHDC4Q8TBB5 520 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 COPRSQ9NQ92 184 aa23.03■■□□□ 1.28
CPSF2-202ENST00000553427 ZBTB7BO15156 539 aaPredicted RBP23.02■■□□□ 1.28
CPSF2-202ENST00000553427 VIL1P09327 827 aaKnown RBP23.02■■□□□ 1.28
CPSF2-202ENST00000553427 METTL24Q5JXM2 366 aa23.02■■□□□ 1.28
CPSF2-202ENST00000553427 PNMA8AQ86V59 439 aaPredicted RBP23.02■■□□□ 1.28
CPSF2-202ENST00000553427 PANK1Q8TE04 598 aa23.02■■□□□ 1.28
CPSF2-202ENST00000553427 DPF2Q92785 391 aa23.02■■□□□ 1.28
CPSF2-202ENST00000553427 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
CPSF2-202ENST00000553427 ADAMTSL1Q8N6G6 1762 aa23.01■■□□□ 1.27
CPSF2-202ENST00000553427 SNAP23O00161 211 aa23.01■■□□□ 1.27
CPSF2-202ENST00000553427 LDHDQ86WU2 507 aa23.01■■□□□ 1.27
CPSF2-202ENST00000553427 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.01■■□□□ 1.27
CPSF2-202ENST00000553427 KCNQ5Q9NR82 932 aa23.01■■□□□ 1.27
CPSF2-202ENST00000553427 SRGAP3O43295 1099 aa23■■□□□ 1.27
CPSF2-202ENST00000553427 PDE8BO95263 885 aa23■■□□□ 1.27
CPSF2-202ENST00000553427 ATG9AQ7Z3C6 839 aa23■■□□□ 1.27
CPSF2-202ENST00000553427 USP17L3A6NCW0 530 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 USP17L4A6NCW7 530 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 PLIN1O60240 522 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 EPS15P42566 896 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 PDE3AQ14432 1141 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 USP17L1Q7RTZ2 530 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 ZNF804AQ7Z570 1209 aa22.99■■□□□ 1.27
CPSF2-202ENST00000553427 ADARB2Q9NS39 739 aaKnown RBP22.99■■□□□ 1.27
CPSF2-202ENST00000553427 IL15P40933 162 aaPredicted RBP22.98■■□□□ 1.27
CPSF2-202ENST00000553427 MVPQ14764 893 aaKnown RBP22.98■■□□□ 1.27
CPSF2-202ENST00000553427 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
CPSF2-202ENST00000553427 RSBN1LQ6PCB5 846 aaPredicted RBP22.98■■□□□ 1.27
CPSF2-202ENST00000553427 USP50Q70EL3 339 aaPredicted RBP22.98■■□□□ 1.27
CPSF2-202ENST00000553427 AGBL3Q8NEM8 1001 aa22.98■■□□□ 1.27
CPSF2-202ENST00000553427 CD209Q9NNX6 404 aa22.98■■□□□ 1.27
CPSF2-202ENST00000553427 ZNF646O15015 1829 aaPredicted RBP22.97■■□□□ 1.27
CPSF2-202ENST00000553427 IL1R1P14778 569 aa22.97■■□□□ 1.27
CPSF2-202ENST00000553427 PUM3Q15397 648 aaKnown RBP22.97■■□□□ 1.27
CPSF2-202ENST00000553427 CHADLQ6NUI6 762 aa22.97■■□□□ 1.27
CPSF2-202ENST00000553427 ZBTB12Q9Y330 459 aaPredicted RBP22.97■■□□□ 1.27
CPSF2-202ENST00000553427 POTEIP0CG38 1075 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 POTEJP0CG39 1038 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 FGFR2P21802 821 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 DACT2Q5SW24 774 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 GMLQ99445 158 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 CNOT7Q9UIV1 285 aaKnown RBP22.96■■□□□ 1.27
CPSF2-202ENST00000553427 DDX19BQ9UMR2 479 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 MYO3BQ8WXR4 1341 aa22.96■■□□□ 1.27
CPSF2-202ENST00000553427 EAPPQ56P03 285 aaPredicted RBP22.95■■□□□ 1.26
CPSF2-202ENST00000553427 MICALL2Q8IY33 904 aa22.95■■□□□ 1.26
CPSF2-202ENST00000553427 SIL1Q9H173 461 aa22.95■■□□□ 1.26
CPSF2-202ENST00000553427 PA2G4Q9UQ80 394 aaKnown RBP22.95■■□□□ 1.26
CPSF2-202ENST00000553427 PNMA6EA0A0J9YXQ4 647 aa22.94■■□□□ 1.26
CPSF2-202ENST00000553427 H7C1D1 291 aa22.94■■□□□ 1.26
CPSF2-202ENST00000553427 POLA2Q14181 598 aa22.94■■□□□ 1.26
CPSF2-202ENST00000553427 SSH3Q8TE77 659 aa22.94■■□□□ 1.26
CPSF2-202ENST00000553427 CHMP4BQ9H444 224 aaKnown RBP22.94■■□□□ 1.26
CPSF2-202ENST00000553427 HSPA6P17066 643 aa22.93■■□□□ 1.26
CPSF2-202ENST00000553427 HIBADHP31937 336 aaKnown RBP22.93■■□□□ 1.26
CPSF2-202ENST00000553427 MMP14P50281 582 aa22.93■■□□□ 1.26
CPSF2-202ENST00000553427 ZNF280AP59817 542 aaPredicted RBP22.93■■□□□ 1.26
CPSF2-202ENST00000553427 ATP8B2P98198 1209 aa22.93■■□□□ 1.26
CPSF2-202ENST00000553427 LPIN2Q92539 896 aa22.93■■□□□ 1.26
CPSF2-202ENST00000553427 FAM84BQ96KN1 310 aaPredicted RBP22.93■■□□□ 1.26
CPSF2-202ENST00000553427 CEP126Q9P2H0 1117 aa22.93■■□□□ 1.26
CPSF2-202ENST00000553427 IFIT1P09914 478 aaKnown RBP22.92■■□□□ 1.26
CPSF2-202ENST00000553427 FKBP1AP62942 108 aaKnown RBP22.92■■□□□ 1.26
CPSF2-202ENST00000553427 TTLL5Q6EMB2 1281 aa22.92■■□□□ 1.26
CPSF2-202ENST00000553427 FBXO33Q7Z6M2 555 aa22.92■■□□□ 1.26
CPSF2-202ENST00000553427 TDRD7Q8NHU6 1098 aaKnown RBP22.92■■□□□ 1.26
CPSF2-202ENST00000553427 C1orf115Q9H7X2 142 aa22.92■■□□□ 1.26
CPSF2-202ENST00000553427 COG6Q9Y2V7 657 aa22.92■■□□□ 1.26
CPSF2-202ENST00000553427 SLC5A1P13866 664 aa22.91■■□□□ 1.26
CPSF2-202ENST00000553427 ZC3H15Q8WU90 426 aaKnown RBP22.91■■□□□ 1.26
CPSF2-202ENST00000553427 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
CPSF2-202ENST00000553427 FAM205AQ6ZU69 1335 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 SHTN1A0MZ66 631 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 SASH1O94885 1247 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 GYG1P46976 350 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 GTF2IP78347 998 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 CAVIN4Q5BKX8 364 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 CEP85Q6P2H3 762 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 TRPM4Q8TD43 1214 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 PGAP2Q9UHJ9 254 aa22.9■■□□□ 1.26
CPSF2-202ENST00000553427 ZBTB22O15209 634 aa22.89■■□□□ 1.25
CPSF2-202ENST00000553427 USP17L8P0C7I0 530 aa22.89■■□□□ 1.25
CPSF2-202ENST00000553427 ATP2B3Q16720 1220 aa22.89■■□□□ 1.25
CPSF2-202ENST00000553427 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.25
CPSF2-202ENST00000553427 CLEC11AQ9Y240 323 aa22.89■■□□□ 1.25
CPSF2-202ENST00000553427 HIRAP54198 1017 aaPredicted RBP22.88■■□□□ 1.25
CPSF2-202ENST00000553427 ARAP2Q8WZ64 1704 aa22.88■■□□□ 1.25
CPSF2-202ENST00000553427 PASKQ96RG2 1323 aa22.87■■□□□ 1.25
CPSF2-202ENST00000553427 ITGBL1O95965 494 aaPredicted RBP22.87■■□□□ 1.25
CPSF2-202ENST00000553427 APLP1P51693 650 aa22.87■■□□□ 1.25
CPSF2-202ENST00000553427 RRP1P56182 461 aaKnown RBP22.87■■□□□ 1.25
CPSF2-202ENST00000553427 VPS37DQ86XT2 251 aa22.87■■□□□ 1.25
CPSF2-202ENST00000553427 FBXW7Q969H0 707 aa22.87■■□□□ 1.25
CPSF2-202ENST00000553427 NOP58Q9Y2X3 529 aaKnown RBP22.87■■□□□ 1.25
CPSF2-202ENST00000553427 G3BP1Q13283 466 aaKnown RBP eCLIP22.86■■□□□ 1.25
CPSF2-202ENST00000553427 KIF4BQ2VIQ3 1234 aa22.86■■□□□ 1.25
CPSF2-202ENST00000553427 SAMD7Q7Z3H4 446 aa22.86■■□□□ 1.25
CPSF2-202ENST00000553427 MXD3Q9BW11 206 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 1364.3 ms