RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 C8orf58Q8NAV2 365 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 KCNG1Q9UIX4 513 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
LIN52-201ENST00000553404 ADCY5O95622 1261 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 NTSR2O95665 410 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 GNAI1P63096 354 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
LIN52-201ENST00000553404 SLC51AQ86UW1 340 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 C7orf43Q8WVR3 580 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 RRAGCQ9HB90 399 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
LIN52-201ENST00000553404 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
LIN52-201ENST00000553404 PPP1R42Q7Z4L9 355 aa11.72□□□□□ -0.53
LIN52-201ENST00000553404 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
LIN52-201ENST00000553404 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
LIN52-201ENST00000553404 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
LIN52-201ENST00000553404 TCIRG1Q13488 830 aa11.71□□□□□ -0.53
LIN52-201ENST00000553404 UTP14AQ9BVJ6 771 aaKnown RBP11.71□□□□□ -0.53
LIN52-201ENST00000553404 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.54
LIN52-201ENST00000553404 HOXB7P09629 217 aa11.71□□□□□ -0.54
LIN52-201ENST00000553404 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.54
LIN52-201ENST00000553404 IRX3P78415 501 aaPredicted RBP11.71□□□□□ -0.54
LIN52-201ENST00000553404 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.54
LIN52-201ENST00000553404 TIGD1Q96MW7 591 aa11.71□□□□□ -0.54
LIN52-201ENST00000553404 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.54
LIN52-201ENST00000553404 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
LIN52-201ENST00000553404 CLGNO14967 610 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
LIN52-201ENST00000553404 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 RPGRQ92834 1020 aaKnown RBP11.7□□□□□ -0.54
LIN52-201ENST00000553404 ALDH1B1P30837 517 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
LIN52-201ENST00000553404 USP26Q9BXU7 913 aa11.7□□□□□ -0.54
LIN52-201ENST00000553404 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
LIN52-201ENST00000553404 FER1L6Q2WGJ9 1857 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 TPM3P06753 285 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 MMP14P50281 582 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 CCDC93Q567U6 631 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 CASC1Q6TDU7 716 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 NLRP3Q96P20 1036 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 ZNF277Q9NRM2 450 aaPredicted RBP11.69□□□□□ -0.54
LIN52-201ENST00000553404 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 SLFN14P0C7P3 912 aa11.69□□□□□ -0.54
LIN52-201ENST00000553404 INTS3Q68E01 1043 aaKnown RBP11.69□□□□□ -0.54
LIN52-201ENST00000553404 TOMM70O94826 608 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 HSP90AB3PQ58FF7 597 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 KIAA1524Q8TCG1 905 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 C16orf71Q8IYS4 520 aaPredicted RBP11.68□□□□□ -0.54
LIN52-201ENST00000553404 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
LIN52-201ENST00000553404 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
LIN52-201ENST00000553404 GOLGA6L6A8MZA4 724 aa11.67□□□□□ -0.54
LIN52-201ENST00000553404 DDNO94850 711 aaPredicted RBP11.67□□□□□ -0.54
LIN52-201ENST00000553404 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
LIN52-201ENST00000553404 SLC20A2Q08357 652 aa11.67□□□□□ -0.54
LIN52-201ENST00000553404 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
LIN52-201ENST00000553404 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
LIN52-201ENST00000553404 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
LIN52-201ENST00000553404 POTECB2RU33 542 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 KDM4AO75164 1064 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
LIN52-201ENST00000553404 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 ISCA1Q9BUE6 129 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 CALCOCO1Q9P1Z2 691 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
LIN52-201ENST00000553404 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
LIN52-201ENST00000553404 HSPA6P17066 643 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 SYCP1Q15431 976 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 TERF2Q15554 542 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 TICAM2Q86XR7 235 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 RTKN2Q8IZC4 609 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
LIN52-201ENST00000553404 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
LIN52-201ENST00000553404 BRD1O95696 1058 aa11.65□□□□□ -0.54
LIN52-201ENST00000553404 FOXD4L6Q3SYB3 417 aaPredicted RBP11.65□□□□□ -0.54
LIN52-201ENST00000553404 CCDC30Q5VVM6 783 aa11.65□□□□□ -0.54
LIN52-201ENST00000553404 FOXD4L3Q6VB84 417 aaPredicted RBP11.65□□□□□ -0.54
LIN52-201ENST00000553404 MYD88Q99836 296 aa11.65□□□□□ -0.54
LIN52-201ENST00000553404 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
LIN52-201ENST00000553404 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
LIN52-201ENST00000553404 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
LIN52-201ENST00000553404 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
LIN52-201ENST00000553404 TWISTNBQ3B726 338 aaPredicted RBP11.65□□□□□ -0.54
LIN52-201ENST00000553404 GRIPAP1Q4V328 841 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms