RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 ANKRD1Q15327 319 aa11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 C3orf67Q6ZVT6 689 aa11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 NOL8Q76FK4 1167 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 NEK1Q96PY6 1258 aa11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 SRP68Q9UHB9 627 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 ANKRD36CQ5JPF3 1778 aa11.21□□□□□ -0.62
MTHFD1-203ENST00000553391 MAST3O60307 1309 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 ZPR1O75312 459 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 ADD2P35612 726 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 PHKA1P46020 1223 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 EXOSC10Q01780 885 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 UBE3CQ15386 1083 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 ME3Q16798 604 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 TRAPPC3LQ5T215 181 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 ZSCAN25Q6NSZ9 544 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 APPBP2Q92624 585 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 BSDC1Q9NW68 430 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 TPCN1Q9ULQ1 816 aa11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-203ENST00000553391 GNPATO15228 680 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 LARGE1O95461 756 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 TM4SF1P30408 202 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 CHRNDQ07001 517 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 ST3GAL1Q11201 340 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 TOB2Q14106 344 aaPredicted RBP11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 PI16Q6UXB8 463 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 TPTE2Q6XPS3 522 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 AMIGO3Q86WK7 504 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 PUS7LQ9H0K6 701 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
MTHFD1-203ENST00000553391 SNAP23O00161 211 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 FOXP2O15409 715 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 BICDL1Q6ZP65 573 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 FAM196AQ6ZSG2 479 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 ANKRD18AQ8IVF6 992 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 SPATA5Q8NB90 893 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.18□□□□□ -0.623e-6■■■■■ 27.9
MTHFD1-203ENST00000553391 LRRC4BQ9NT99 713 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 CTNNA3Q9UI47 895 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 MINPP1Q9UNW1 487 aa11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-203ENST00000553391 TCRBV5S4A2TA0A5A2 114 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 GOLGA6L22H0YM25 854 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 ZBTB22O15209 634 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 FGAP02671 866 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 BCAMP50895 628 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 ALX1Q15699 326 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 CCDC83Q8IWF9 413 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 FBXL16Q8N461 479 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 AGXT2Q9BYV1 514 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 SMC3Q9UQE7 1217 aa11.17□□□□□ -0.62
MTHFD1-203ENST00000553391 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 WDR33Q9C0J8 1336 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 A0A0G2JLW4 131 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 E7EWF7 191 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 SYT1P21579 422 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 RFC4P35249 363 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 Q6ZUG5 572 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 NBPF5PQ86XG9 351 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 NECAB1Q8N987 351 aa11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 STRBPQ96SI9 672 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-203ENST00000553391 GPAA1O43292 621 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 PDE6AP16499 860 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 GJB2P29033 226 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 RASGRF1Q13972 1273 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 SLC27A3Q5K4L6 730 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 TCEANC2Q96MN5 208 aa11.15□□□□□ -0.62
MTHFD1-203ENST00000553391 NHSQ6T4R5 1651 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 ZNF532Q9HCE3 1301 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 LRP5O75197 1615 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 FSD2A1L4K1 749 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 STX6O43752 255 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 PFKFB2O60825 505 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 PRPF40AO75400 957 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms