RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 LRRC24Q50LG9 513 aa12.02□□□□□ -0.49
TMEM260-204ENST00000553335 SP8Q8IXZ3 490 aa12.02□□□□□ -0.49
TMEM260-204ENST00000553335 SMC5Q8IY18 1101 aa12.02□□□□□ -0.49
TMEM260-204ENST00000553335 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.49
TMEM260-204ENST00000553335 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.49
TMEM260-204ENST00000553335 ANKRD2Q9GZV1 360 aa12.02□□□□□ -0.49
TMEM260-204ENST00000553335 YY1P25490 414 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 DALRD3Q5D0E6 543 aaKnown RBP12.01□□□□□ -0.49
TMEM260-204ENST00000553335 METTL24Q5JXM2 366 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 PRPF40BQ6NWY9 871 aaKnown RBP12.01□□□□□ -0.49
TMEM260-204ENST00000553335 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 RHPN1Q8TCX5 695 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 SYT17Q9BSW7 474 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 CEP126Q9P2H0 1117 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 RIPOR2Q9Y4F9 1068 aa12.01□□□□□ -0.49
TMEM260-204ENST00000553335 APBB1O00213 710 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 PPP1R37O75864 691 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 SASH1O94885 1247 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 CHRNDQ07001 517 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 CC2D2BQ6DHV5 1058 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
TMEM260-204ENST00000553335 PDE8BO95263 885 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 TFCP2Q12800 502 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 ANKRD45Q5TZF3 282 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
TMEM260-204ENST00000553335 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 GPR108Q9NPR9 543 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 ANKIB1Q9P2G1 1089 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 XDHP47989 1333 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 ARAP2Q8WZ64 1704 aa11.99□□□□□ -0.49
TMEM260-204ENST00000553335 KCNJ4P48050 445 aa11.98□□□□□ -0.49
TMEM260-204ENST00000553335 MPNDQ8N594 471 aa11.98□□□□□ -0.49
TMEM260-204ENST00000553335 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
TMEM260-204ENST00000553335 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
TMEM260-204ENST00000553335 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
TMEM260-204ENST00000553335 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
TMEM260-204ENST00000553335 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 C21orf2O43822 256 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 TAF5LO75529 589 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 ATP2B4P23634 1241 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 UBE4AQ14139 1066 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 PUM3Q15397 648 aaKnown RBP11.97□□□□□ -0.49
TMEM260-204ENST00000553335 CCDC93Q567U6 631 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 IL1RAPL2Q9NP60 686 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 PODXL2Q9NZ53 605 aa11.97□□□□□ -0.49
TMEM260-204ENST00000553335 MYH13Q9UKX3 1938 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 SMARCA5O60264 1052 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-204ENST00000553335 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
TMEM260-204ENST00000553335 SLC5A1P13866 664 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 GPSM2P81274 684 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 NUCB1Q02818 461 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 GPR162Q16538 588 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 TNNI3KQ59H18 835 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 DPP8Q6V1X1 898 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-204ENST00000553335 CHD1LQ86WJ1 897 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
TMEM260-204ENST00000553335 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 LPIN2Q92539 896 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.49
TMEM260-204ENST00000553335 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
TMEM260-204ENST00000553335 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
TMEM260-204ENST00000553335 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
TMEM260-204ENST00000553335 IFIT2P09913 472 aaKnown RBP11.95□□□□□ -0.5
TMEM260-204ENST00000553335 AACSQ86V21 672 aa11.95□□□□□ -0.5
TMEM260-204ENST00000553335 EYA3Q99504 573 aa11.95□□□□□ -0.5
TMEM260-204ENST00000553335 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
TMEM260-204ENST00000553335 ZNF609O15014 1411 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 UFL1O94874 794 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 FGFR2P21802 821 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 TBC1D16Q8TBP0 767 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-204ENST00000553335 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-204ENST00000553335 CHD4Q14839 1912 aa11.94□□□□□ -0.5
TMEM260-204ENST00000553335 TIMM10P62072 90 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 CCDC158Q5M9N0 1113 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 OLFM4Q6UX06 510 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 PSMD1Q99460 953 aa11.93□□□□□ -0.5
TMEM260-204ENST00000553335 RTFDC1Q9BY42 306 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms