RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ATF7IPQ6VMQ6 1270 aa24.26■■□□□ 1.47
PTCH1-227ENST00000553256 MICALL2Q8IY33 904 aa24.26■■□□□ 1.47
PTCH1-227ENST00000553256 DACT2Q5SW24 774 aa24.25■■□□□ 1.47
PTCH1-227ENST00000553256 RSBN1LQ6PCB5 846 aaPredicted RBP24.25■■□□□ 1.47
PTCH1-227ENST00000553256 CNTROBQ8N137 903 aa24.25■■□□□ 1.47
PTCH1-227ENST00000553256 VGLL2Q8N8G2 317 aa24.25■■□□□ 1.47
PTCH1-227ENST00000553256 MEIS3Q99687 375 aa24.25■■□□□ 1.47
PTCH1-227ENST00000553256 PCNTO95613 3336 aa24.24■■□□□ 1.47
PTCH1-227ENST00000553256 ZNF280AP59817 542 aaPredicted RBP24.24■■□□□ 1.47
PTCH1-227ENST00000553256 LRRC24Q50LG9 513 aa24.24■■□□□ 1.47
PTCH1-227ENST00000553256 USP17L3A6NCW0 530 aa24.23■■□□□ 1.47
PTCH1-227ENST00000553256 USP17L4A6NCW7 530 aa24.23■■□□□ 1.47
PTCH1-227ENST00000553256 PTPN12Q05209 780 aaKnown RBP24.23■■□□□ 1.47
PTCH1-227ENST00000553256 USP17L1Q7RTZ2 530 aa24.23■■□□□ 1.47
PTCH1-227ENST00000553256 AGBL3Q8NEM8 1001 aa24.23■■□□□ 1.47
PTCH1-227ENST00000553256 KLHDC4Q8TBB5 520 aa24.23■■□□□ 1.47
PTCH1-227ENST00000553256 ZC3H15Q8WU90 426 aaKnown RBP24.23■■□□□ 1.47
PTCH1-227ENST00000553256 IPO8O15397 1037 aaKnown RBP24.22■■□□□ 1.47
PTCH1-227ENST00000553256 SAMD7Q7Z3H4 446 aa24.22■■□□□ 1.47
PTCH1-227ENST00000553256 CD209Q9NNX6 404 aa24.22■■□□□ 1.47
PTCH1-227ENST00000553256 CNNM1Q9NRU3 951 aa24.22■■□□□ 1.47
PTCH1-227ENST00000553256 CLEC11AQ9Y240 323 aa24.22■■□□□ 1.47
PTCH1-227ENST00000553256 UBTFL1P0CB47 393 aaPredicted RBP24.21■■□□□ 1.47
PTCH1-227ENST00000553256 STRIP1Q5VSL9 837 aa24.21■■□□□ 1.47
PTCH1-227ENST00000553256 IL1R1P14778 569 aa24.2■■□□□ 1.46
PTCH1-227ENST00000553256 FMR1Q06787 632 aaKnown RBP eCLIP24.2■■□□□ 1.462e-7■■■■■ 26.8
PTCH1-227ENST00000553256 UBE4AQ14139 1066 aa24.2■■□□□ 1.46
PTCH1-227ENST00000553256 TAF7LQ5H9L4 462 aa24.2■■□□□ 1.46
PTCH1-227ENST00000553256 MXD3Q9BW11 206 aa24.2■■□□□ 1.46
PTCH1-227ENST00000553256 CREBZFQ9NS37 354 aa24.2■■□□□ 1.46
PTCH1-227ENST00000553256 LRRFIP2Q9Y608 721 aaKnown RBP24.2■■□□□ 1.46
PTCH1-227ENST00000553256 MROH5Q6ZUA9 1318 aa24.19■■□□□ 1.46
PTCH1-227ENST00000553256 H7C1D1 291 aa24.19■■□□□ 1.46
PTCH1-227ENST00000553256 ATG9AQ7Z3C6 839 aa24.19■■□□□ 1.46
PTCH1-227ENST00000553256 KLRG1Q96E93 195 aa24.19■■□□□ 1.46
PTCH1-227ENST00000553256 MTX1Q13505 466 aa24.18■■□□□ 1.46
PTCH1-227ENST00000553256 ZKSCAN2Q63HK3 967 aa24.18■■□□□ 1.46
PTCH1-227ENST00000553256 FRAT1Q92837 279 aaPredicted RBP24.18■■□□□ 1.46
PTCH1-227ENST00000553256 G3V3G9 751 aa24.17■■□□□ 1.46
PTCH1-227ENST00000553256 FGFR2P21802 821 aa24.17■■□□□ 1.46
PTCH1-227ENST00000553256 TBC1D10BQ4KMP7 808 aaPredicted RBP24.17■■□□□ 1.46
PTCH1-227ENST00000553256 DCAF8Q5TAQ9 597 aa24.17■■□□□ 1.46
PTCH1-227ENST00000553256 TMEM57Q8N5G2 664 aa24.17■■□□□ 1.46
PTCH1-227ENST00000553256 JMYQ8N9B5 988 aa24.17■■□□□ 1.46
PTCH1-227ENST00000553256 FAM84BQ96KN1 310 aaPredicted RBP24.17■■□□□ 1.46
PTCH1-227ENST00000553256 EYA2O00167 538 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 TRAF5O00463 557 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 RLBP1P12271 317 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 KCNJ4P48050 445 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 CST9Q5W186 159 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 CERS5Q8N5B7 392 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 CLUAP1Q96AJ1 413 aa24.16■■□□□ 1.46
PTCH1-227ENST00000553256 PLIN1O60240 522 aa24.15■■□□□ 1.46
PTCH1-227ENST00000553256 PDE8BO95263 885 aa24.15■■□□□ 1.46
PTCH1-227ENST00000553256 TTLL5Q6EMB2 1281 aa24.15■■□□□ 1.46
PTCH1-227ENST00000553256 ASTN2O75129 1339 aaPredicted RBP24.14■■□□□ 1.46
PTCH1-227ENST00000553256 GNAI3P08754 354 aa24.14■■□□□ 1.45
PTCH1-227ENST00000553256 USP17L8P0C7I0 530 aa24.14■■□□□ 1.45
PTCH1-227ENST00000553256 KIF4BQ2VIQ3 1234 aa24.14■■□□□ 1.45
PTCH1-227ENST00000553256 FBXO33Q7Z6M2 555 aa24.14■■□□□ 1.45
PTCH1-227ENST00000553256 TDRD7Q8NHU6 1098 aaKnown RBP24.14■■□□□ 1.45
PTCH1-227ENST00000553256 GLIS2Q9BZE0 524 aaPredicted RBP24.14■■□□□ 1.45
PTCH1-227ENST00000553256 COPRSQ9NQ92 184 aa24.14■■□□□ 1.45
PTCH1-227ENST00000553256 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
PTCH1-227ENST00000553256 MYO3BQ8WXR4 1341 aa24.13■■□□□ 1.45
PTCH1-227ENST00000553256 TMEM88BA6NKF7 163 aa24.13■■□□□ 1.45
PTCH1-227ENST00000553256 GTF2IP78347 998 aa24.13■■□□□ 1.45
PTCH1-227ENST00000553256 ZBED3Q96IU2 234 aaPredicted RBP24.13■■□□□ 1.45
PTCH1-227ENST00000553256 FAM205AQ6ZU69 1335 aa24.12■■□□□ 1.45
PTCH1-227ENST00000553256 CIAO1O76071 339 aa24.12■■□□□ 1.45
PTCH1-227ENST00000553256 GYG1P46976 350 aa24.12■■□□□ 1.45
PTCH1-227ENST00000553256 ZNF804AQ7Z570 1209 aa24.12■■□□□ 1.45
PTCH1-227ENST00000553256 MYOZ2Q9NPC6 264 aa24.12■■□□□ 1.45
PTCH1-227ENST00000553256 HDAC5Q9UQL6 1122 aa24.12■■□□□ 1.45
PTCH1-227ENST00000553256 SASH1O94885 1247 aa24.11■■□□□ 1.45
PTCH1-227ENST00000553256 FKBP1AP62942 108 aaKnown RBP24.11■■□□□ 1.45
PTCH1-227ENST00000553256 METTL24Q5JXM2 366 aa24.11■■□□□ 1.45
PTCH1-227ENST00000553256 DLK2Q6UY11 383 aa24.11■■□□□ 1.45
PTCH1-227ENST00000553256 CNTNAP1P78357 1384 aa24.11■■□□□ 1.45
PTCH1-227ENST00000553256 CDC37L1Q7L3B6 337 aa24.1■■□□□ 1.45
PTCH1-227ENST00000553256 PA2G4Q9UQ80 394 aaKnown RBP24.1■■□□□ 1.45
PTCH1-227ENST00000553256 RASSF10A6NK89 507 aa24.09■■□□□ 1.45
PTCH1-227ENST00000553256 ZBTB7BO15156 539 aaPredicted RBP24.09■■□□□ 1.45
PTCH1-227ENST00000553256 HIBADHP31937 336 aaKnown RBP24.09■■□□□ 1.45
PTCH1-227ENST00000553256 MMP14P50281 582 aa24.09■■□□□ 1.45
PTCH1-227ENST00000553256 RBM26Q5T8P6 1007 aaKnown RBP24.09■■□□□ 1.45
PTCH1-227ENST00000553256 DZIP1LQ8IYY4 767 aaKnown RBP24.09■■□□□ 1.45
PTCH1-227ENST00000553256 SCARF1Q14162 830 aa24.08■■□□□ 1.45
PTCH1-227ENST00000553256 TRPM7Q96QT4 1865 aa24.08■■□□□ 1.45
PTCH1-227ENST00000553256 GNAI2P04899 355 aa24.07■■□□□ 1.44
PTCH1-227ENST00000553256 PUM3Q15397 648 aaKnown RBP24.07■■□□□ 1.44
PTCH1-227ENST00000553256 USP48Q86UV5 1035 aa24.07■■□□□ 1.44
PTCH1-227ENST00000553256 POLR2AP24928 1970 aaKnown RBP24.07■■□□□ 1.44
PTCH1-227ENST00000553256 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 WNT10BO00744 389 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 ZBTB22O15209 634 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 NBPF9Q3BBW0 867 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 KIAA0825Q8IV33 1275 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 MTMR14Q8NCE2 650 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 GGA3Q9NZ52 723 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms