RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 UBE3BQ7Z3V4 1068 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 PLBD2Q8NHP8 589 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 SCAND2PQ9GZW5 306 aaPredicted RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 CCDC8Q9H0W5 538 aaPredicted RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 ECHDC1Q9NTX5 307 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 CGNQ9P2M7 1197 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 MYH7P12883 1935 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 HIP1O00291 1037 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 PSMA5P28066 241 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 NEXNQ0ZGT2 675 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 ANKRD1Q15327 319 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 ERC1Q8IUD2 1116 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 CCDC83Q8IWF9 413 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 CLASRPQ8N2M8 674 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 FOXO4P98177 505 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 TYRO3Q06418 890 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 ATP2B3Q16720 1220 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 CWC27Q6UX04 472 aaKnown RBP8.64□□□□□ -1.03
BEST3-212ENST00000553096 RASEFQ8IZ41 740 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 TSC1Q92574 1164 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 VPS37CA5D8V6 355 aaPredicted RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 GOLGA6L4A6NEF3 574 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 NEMFO60524 1076 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 CDC25BP30305 580 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 IRX5P78411 483 aaPredicted RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 PTH1RQ03431 593 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 GABPB1Q06547 395 aaPredicted RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 SPC24Q8NBT2 197 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 JAKMIP1Q96N16 626 aaKnown RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 SPEF2Q9C093 1822 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 RREB1Q92766 1687 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 MAFGO15525 162 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 IFIT2P09913 472 aaKnown RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 COL9A3Q14050 684 aaPredicted RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 NBPF20Q3BBV1 942 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 FNBP4Q8N3X1 1017 aaPredicted RBP8.63□□□□□ -1.03
BEST3-212ENST00000553096 TNMDQ9H2S6 317 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 COPRSQ9NQ92 184 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 BTG4Q9NY30 223 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 MRVI1Q9Y6F6 885 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 SLIT2O94813 1529 aa8.63□□□□□ -1.03
BEST3-212ENST00000553096 A0A087WZG4 1122 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 AP5Z1O43299 807 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
BEST3-212ENST00000553096 LARP1BQ659C4 914 aaKnown RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 DRC7Q8IY82 874 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 TDRD7Q8NHU6 1098 aaKnown RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 GEMIN8Q9NWZ8 242 aaKnown RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 H7C1W4 665 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 PTGS1P23219 599 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 RXRBP28702 533 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 SLC20A2Q08357 652 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 TFCP2Q12800 502 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 RBM43Q6ZSC3 357 aaKnown RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 EDC3Q96F86 508 aaKnown RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 FAM227BQ96M60 508 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 ALDH8A1Q9H2A2 487 aaPredicted RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 DBNLQ9UJU6 430 aaKnown RBP8.62□□□□□ -1.03
BEST3-212ENST00000553096 ASAP1Q9ULH1 1129 aa8.62□□□□□ -1.03
BEST3-212ENST00000553096 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
BEST3-212ENST00000553096 BCL9LQ86UU0 1499 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 CHGBP05060 677 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 ZNF75DP51815 510 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 PLA2G4DQ86XP0 818 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 CCDC112Q8NEF3 446 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 PIGBQ92521 554 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 CLSTN2Q9H4D0 955 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 ZBTB3Q9H5J0 574 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 AKAP11Q9UKA4 1901 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 MED23Q9ULK4 1368 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 LARGE1O95461 756 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 CPA1P15085 419 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 EVA1CP58658 441 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 CCDC186Q7Z3E2 898 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 SLC4A9Q96Q91 983 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 TRIM5Q9C035 493 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 NDUFB9Q9Y6M9 179 aa8.61□□□□□ -1.03
BEST3-212ENST00000553096 DDX60Q8IY21 1712 aaKnown RBP8.61□□□□□ -1.03
BEST3-212ENST00000553096 CICQ96RK0 1608 aaPredicted RBP8.61□□□□□ -1.03
BEST3-212ENST00000553096 COL5A3P25940 1745 aaPredicted RBP8.61□□□□□ -1.03
BEST3-212ENST00000553096 A0A0D9SFI3 127 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 TNNT1P13805 278 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 NCBP1Q09161 790 aaKnown RBP8.6□□□□□ -1.03
BEST3-212ENST00000553096 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
BEST3-212ENST00000553096 TNNI3KQ59H18 835 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
BEST3-212ENST00000553096 TTC6Q86TZ1 520 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 SPATA32Q96LK8 384 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 BOLA2Q9H3K6 86 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 SNRKQ9NRH2 765 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 FPGT-TNNI3KV9GXZ4 949 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms