RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GMLQ99445 158 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 MYOZ2Q9NPC6 264 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 CCDC85CA6NKD9 419 aa14.66□□□□□ -0.06
NEK3-204ENST00000552973 FAM155AB1AL88 458 aaPredicted RBP14.66□□□□□ -0.06
NEK3-204ENST00000552973 KLRK1P26718 216 aa14.66□□□□□ -0.06
NEK3-204ENST00000552973 CASP7P55210 303 aa14.66□□□□□ -0.06
NEK3-204ENST00000552973 KIF23Q02241 960 aaPredicted RBP14.66□□□□□ -0.06
NEK3-204ENST00000552973 TRPM7Q96QT4 1865 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 F6X3S4 739 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 CA12O43570 354 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 PRAMEF18Q5VWM3 479 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 MPHOSPH8Q99549 860 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 MYH16Q9H6N6 1097 aa14.65□□□□□ -0.06
NEK3-204ENST00000552973 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
NEK3-204ENST00000552973 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 THSD7BQ9C0I4 1608 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 NBPF9Q3BBW0 867 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 DACT2Q5SW24 774 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 MOB2Q70IA6 237 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 WDR63Q8IWG1 891 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 CCDC102AQ96A19 550 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 COA1Q9GZY4 146 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 LEMD3Q9Y2U8 911 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 ZNF804BA4D1E1 1349 aa14.64□□□□□ -0.07
NEK3-204ENST00000552973 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
NEK3-204ENST00000552973 SNAP23O00161 211 aa14.63□□□□□ -0.07
NEK3-204ENST00000552973 CSF1RP07333 972 aa14.63□□□□□ -0.07
NEK3-204ENST00000552973 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
NEK3-204ENST00000552973 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
NEK3-204ENST00000552973 MCOLN1Q9GZU1 580 aa14.63□□□□□ -0.07
NEK3-204ENST00000552973 ANKRD2Q9GZV1 360 aa14.63□□□□□ -0.07
NEK3-204ENST00000552973 CHMP3Q9Y3E7 222 aa14.63□□□□□ -0.07
NEK3-204ENST00000552973 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 ANKRD18BA2A2Z9 1011 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 TAF5LO75529 589 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 KCNJ4P48050 445 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 CHRNDQ07001 517 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 STRIP1Q5VSL9 837 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 OGFOD1Q8N543 542 aa14.62□□□□□ -0.07
NEK3-204ENST00000552973 HELBQ8NG08 1087 aaPredicted RBP14.62□□□□□ -0.07
NEK3-204ENST00000552973 UBE2Q2LH0YL09 131 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 WNT10BO00744 389 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 TRPA1O75762 1119 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 SASH1O94885 1247 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 SLC10A3P09131 477 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 GTF2IP78347 998 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 DGKZQ13574 1117 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 BEND3Q5T5X7 828 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 KIAA0825Q8IV33 1275 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 CSRNP1Q96S65 589 aa14.61□□□□□ -0.07
NEK3-204ENST00000552973 ZNF609O15014 1411 aa14.6□□□□□ -0.07
NEK3-204ENST00000552973 ZEB1P37275 1124 aaPredicted RBP14.6□□□□□ -0.07
NEK3-204ENST00000552973 FOXO4P98177 505 aa14.6□□□□□ -0.07
NEK3-204ENST00000552973 TTLL12Q14166 644 aaPredicted RBP14.6□□□□□ -0.07
NEK3-204ENST00000552973 RNF186Q9NXI6 227 aa14.6□□□□□ -0.07
NEK3-204ENST00000552973 PLIN1O60240 522 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 IFIT5Q13325 482 aaKnown RBP14.59□□□□□ -0.07
NEK3-204ENST00000552973 PRKG1Q13976 671 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 EPHA10Q5JZY3 1008 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 LMBR1LQ6UX01 489 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 RASAL3Q86YV0 1011 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
NEK3-204ENST00000552973 CD209Q9NNX6 404 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 PITPNM2Q9BZ72 1349 aa14.59□□□□□ -0.07
NEK3-204ENST00000552973 MKRN3Q13064 507 aaKnown RBP14.58□□□□□ -0.08
NEK3-204ENST00000552973 SLC4A10Q6U841 1118 aa14.58□□□□□ -0.08
NEK3-204ENST00000552973 HDAC9Q9UKV0 1011 aa14.58□□□□□ -0.08
NEK3-204ENST00000552973 JAG2Q9Y219 1238 aa14.58□□□□□ -0.08
NEK3-204ENST00000552973 F8W031 263 aaPredicted RBP14.57□□□□□ -0.08
NEK3-204ENST00000552973 FKBP1BP68106 108 aa14.57□□□□□ -0.08
NEK3-204ENST00000552973 TAF7LQ5H9L4 462 aa14.57□□□□□ -0.08
NEK3-204ENST00000552973 SAGE1Q9NXZ1 904 aa14.57□□□□□ -0.08
NEK3-204ENST00000552973 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.57□□□□□ -0.08
NEK3-204ENST00000552973 GRM8O00222 908 aa14.56□□□□□ -0.08
NEK3-204ENST00000552973 CERS5Q8N5B7 392 aa14.56□□□□□ -0.08
NEK3-204ENST00000552973 C9orf78Q9NZ63 289 aaPredicted RBP14.56□□□□□ -0.08
NEK3-204ENST00000552973 FZD1Q9UP38 647 aa14.56□□□□□ -0.08
NEK3-204ENST00000552973 PCDHAC2Q9Y5I4 1007 aa14.56□□□□□ -0.08
NEK3-204ENST00000552973 CCDC57Q2TAC2 916 aa14.55□□□□□ -0.08
NEK3-204ENST00000552973 LDHAL6AQ6ZMR3 332 aa14.55□□□□□ -0.08
NEK3-204ENST00000552973 CNNM1Q9NRU3 951 aa14.55□□□□□ -0.08
NEK3-204ENST00000552973 IRS2Q9Y4H2 1338 aa14.55□□□□□ -0.08
NEK3-204ENST00000552973 POLR2AP24928 1970 aaKnown RBP14.54□□□□□ -0.08
NEK3-204ENST00000552973 NF2P35240 595 aa14.54□□□□□ -0.08
NEK3-204ENST00000552973 PTPN12Q05209 780 aaKnown RBP14.54□□□□□ -0.08
NEK3-204ENST00000552973 DLGAP5Q15398 846 aa14.54□□□□□ -0.08
NEK3-204ENST00000552973 ZBED3Q96IU2 234 aaPredicted RBP14.54□□□□□ -0.08
NEK3-204ENST00000552973 CLRN2A0PK11 232 aa14.53□□□□□ -0.08
NEK3-204ENST00000552973 TBC1D8O95759 1140 aa14.53□□□□□ -0.08
NEK3-204ENST00000552973 MLLT1Q03111 559 aaPredicted RBP14.53□□□□□ -0.08
NEK3-204ENST00000552973 ZNF804AQ7Z570 1209 aa14.53□□□□□ -0.08
NEK3-204ENST00000552973 APOBEC3FQ8IUX4 373 aaKnown RBP14.53□□□□□ -0.08
NEK3-204ENST00000552973 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
NEK3-204ENST00000552973 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
NEK3-204ENST00000552973 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
NEK3-204ENST00000552973 ALDH1L1O75891 902 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms