RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PLIN1O60240 522 aa12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 FRAT2O75474 233 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 TOMM70O94826 608 aa12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 POLA2Q14181 598 aa12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 GPR108Q9NPR9 543 aa12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 GJA3Q9Y6H8 435 aa12.68□□□□□ -0.38
TRAFD1-208ENST00000552890 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 SASH1O94885 1247 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 IL1R1P14778 569 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 CXCL9Q07325 125 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 FSTL1Q12841 308 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 ZGPATQ8N5A5 531 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 HDAC9Q9UKV0 1011 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 NOP58Q9Y2X3 529 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 ZNF609O15014 1411 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 SCN4AP35499 1836 aa12.67□□□□□ -0.38
TRAFD1-208ENST00000552890 TAF1P21675 1872 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 TAF5LO75529 589 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 PRELPP51888 382 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 GORABQ5T7V8 394 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 SIL1Q9H173 461 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 CD209Q9NNX6 404 aa12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-208ENST00000552890 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 RAD17O75943 681 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 LRRC24Q50LG9 513 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 VGLL2Q8N8G2 317 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 SMC1BQ8NDV3 1235 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 ZNF526Q8TF50 670 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 RRAGCQ9HB90 399 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 GPRC5DQ9NZD1 345 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
TRAFD1-208ENST00000552890 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 MAST3O60307 1309 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 CENPBP07199 599 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 EPHX2P34913 555 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 KIF1BPQ96EK5 621 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 DENND2AQ9ULE3 1009 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
TRAFD1-208ENST00000552890 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 PSMD14O00487 310 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 FGFR2P21802 821 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 CCDC158Q5M9N0 1113 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 TAF1DQ9H5J8 278 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-208ENST00000552890 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-208ENST00000552890 MYO1BO43795 1136 aa12.62□□□□□ -0.39
TRAFD1-208ENST00000552890 GMPSP49915 693 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-208ENST00000552890 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
TRAFD1-208ENST00000552890 MRIQ9BWK5 157 aa12.62□□□□□ -0.39
TRAFD1-208ENST00000552890 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
TRAFD1-208ENST00000552890 YDJCA8MPS7 323 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 KIF3CO14782 793 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 GTF2IP78347 998 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 HDLBPQ00341 1268 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 RWDD1Q9H446 243 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 NMRK2Q9NPI5 230 aa12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 PA2G4Q9UQ80 394 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-208ENST00000552890 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 SCNN1DP51172 638 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 ZNF280AP59817 542 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 TFCP2Q12800 502 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms