RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 HOXD10P28358 340 aa11.64□□□□□ -0.55
PRKCH-203ENST00000552875 CAP1Q01518 475 aa11.64□□□□□ -0.55
PRKCH-203ENST00000552875 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-203ENST00000552875 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
PRKCH-203ENST00000552875 TBC1D16Q8TBP0 767 aa11.64□□□□□ -0.55
PRKCH-203ENST00000552875 BIN2Q9UBW5 565 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-203ENST00000552875 TMEM265A0A087WTH1 108 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 WNT10BO00744 389 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 CCL5P13501 91 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 HCLS1P14317 486 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-203ENST00000552875 MYL6BP14649 208 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 IREB2P48200 963 aaKnown RBP11.63□□□□□ -0.55
PRKCH-203ENST00000552875 GPSM2P81274 684 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 LACTBP83111 547 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-203ENST00000552875 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-203ENST00000552875 RAET1EQ8TD07 263 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 U2AF1L4Q8WU68 220 aaKnown RBP11.63□□□□□ -0.55
PRKCH-203ENST00000552875 TRIM47Q96LD4 638 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 GMLQ99445 158 aa11.63□□□□□ -0.55
PRKCH-203ENST00000552875 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
PRKCH-203ENST00000552875 GRK4P32298 578 aa11.62□□□□□ -0.55
PRKCH-203ENST00000552875 SUPT20HL1Q3ZLR7 823 aa11.62□□□□□ -0.55
PRKCH-203ENST00000552875 HSP90AB3PQ58FF7 597 aa11.62□□□□□ -0.55
PRKCH-203ENST00000552875 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
PRKCH-203ENST00000552875 PTPN18Q99952 460 aa11.62□□□□□ -0.55
PRKCH-203ENST00000552875 COL1A1P02452 1464 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-203ENST00000552875 SH3TC1Q8TE82 1336 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 ANKRD13AQ8IZ07 590 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 CLMNQ96JQ2 1002 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 UBE2OQ9C0C9 1292 aaKnown RBP11.61□□□□□ -0.55
PRKCH-203ENST00000552875 PANK3Q9H999 370 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 ANKIB1Q9P2G1 1089 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 TRMT112Q9UI30 125 aaKnown RBP11.61□□□□□ -0.55
PRKCH-203ENST00000552875 PPP2R3BQ9Y5P8 575 aa11.61□□□□□ -0.55
PRKCH-203ENST00000552875 SIPA1L3O60292 1781 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-203ENST00000552875 UFL1O94874 794 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 SGPL1O95470 568 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
PRKCH-203ENST00000552875 GUCD1Q96NT3 240 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 RAPGEFL1Q9UHV5 662 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 RIPOR2Q9Y4F9 1068 aa11.6□□□□□ -0.55
PRKCH-203ENST00000552875 SPTBN5Q9NRC6 3674 aaKnown RBP11.59□□□□□ -0.55
PRKCH-203ENST00000552875 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
PRKCH-203ENST00000552875 TLR2O60603 784 aa11.59□□□□□ -0.55
PRKCH-203ENST00000552875 TFRCP02786 760 aaKnown RBP11.59□□□□□ -0.55
PRKCH-203ENST00000552875 GTF2A2P52657 109 aa11.59□□□□□ -0.55
PRKCH-203ENST00000552875 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
PRKCH-203ENST00000552875 DEFB129Q9H1M3 183 aa11.59□□□□□ -0.55
PRKCH-203ENST00000552875 SRRDQ9UH36 339 aa11.59□□□□□ -0.55
PRKCH-203ENST00000552875 FAM205AQ6ZU69 1335 aa11.59□□□□□ -0.55
PRKCH-203ENST00000552875 CCL15-CCL14A0A0B4J2E2 113 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 SASH1O94885 1247 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 MAP3K12Q12852 859 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 CCL15Q16663 113 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 NECAB2Q7Z6G3 386 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 C7orf61Q8IZ16 206 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 CELF1Q92879 486 aaKnown RBP11.58□□□□□ -0.56
PRKCH-203ENST00000552875 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 ARHGAP39Q9C0H5 1083 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 FZD1Q9UP38 647 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
PRKCH-203ENST00000552875 NUP98P52948 1817 aa11.58□□□□□ -0.56
PRKCH-203ENST00000552875 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
PRKCH-203ENST00000552875 MAGEA10P43363 369 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-203ENST00000552875 RPS8P62241 208 aaKnown RBP11.57□□□□□ -0.56
PRKCH-203ENST00000552875 TAF7Q15545 349 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-203ENST00000552875 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
PRKCH-203ENST00000552875 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
PRKCH-203ENST00000552875 FAM161BQ96MY7 647 aa11.57□□□□□ -0.56
PRKCH-203ENST00000552875 ZCCHC17Q9NP64 241 aaKnown RBP11.57□□□□□ -0.56
PRKCH-203ENST00000552875 ZMYND8Q9ULU4 1186 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-203ENST00000552875 ARIH1Q9Y4X5 557 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-203ENST00000552875 MYO1BO43795 1136 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-203ENST00000552875 GJA5P36382 358 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 SF3B3Q15393 1217 aaKnown RBP11.56□□□□□ -0.56
PRKCH-203ENST00000552875 MCM10Q7L590 875 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
PRKCH-203ENST00000552875 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 SNX27Q96L92 541 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 SYNGAP1Q96PV0 1343 aa11.56□□□□□ -0.56
PRKCH-203ENST00000552875 ANKRD36CQ5JPF3 1778 aa11.55□□□□□ -0.56
PRKCH-203ENST00000552875 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
PRKCH-203ENST00000552875 PSMC4P43686 418 aa11.55□□□□□ -0.56
PRKCH-203ENST00000552875 BRI3BPQ8WY22 251 aa11.55□□□□□ -0.56
PRKCH-203ENST00000552875 FBXW7Q969H0 707 aa11.55□□□□□ -0.56
PRKCH-203ENST00000552875 ELP3Q9H9T3 547 aa11.55□□□□□ -0.56
PRKCH-203ENST00000552875 MYPNQ86TC9 1320 aa11.55□□□□□ -0.56
PRKCH-203ENST00000552875 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
PRKCH-203ENST00000552875 STRIP1Q5VSL9 837 aa11.54□□□□□ -0.56
PRKCH-203ENST00000552875 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms