RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 NF2P35240 595 aa19.47■□□□□ 0.71
LINC02396-204ENST00000552628 USP17L1Q7RTZ2 530 aa19.47■□□□□ 0.71
LINC02396-204ENST00000552628 ZNF296Q8WUU4 475 aaPredicted RBP19.47■□□□□ 0.71
LINC02396-204ENST00000552628 SALL2Q9Y467 1007 aaPredicted RBP19.47■□□□□ 0.71
LINC02396-204ENST00000552628 ANKRD18AQ8IVF6 992 aa19.46■□□□□ 0.71
LINC02396-204ENST00000552628 OGFOD1Q8N543 542 aa19.46■□□□□ 0.71
LINC02396-204ENST00000552628 LRRC37AA6NMS7 1700 aa19.45■□□□□ 0.7
LINC02396-204ENST00000552628 PDE8AO60658 829 aa19.45■□□□□ 0.7
LINC02396-204ENST00000552628 ATP2B4P23634 1241 aa19.45■□□□□ 0.7
LINC02396-204ENST00000552628 TRIM28Q13263 835 aaKnown RBP19.45■□□□□ 0.7
LINC02396-204ENST00000552628 PRKG1Q13976 671 aa19.45■□□□□ 0.7
LINC02396-204ENST00000552628 PODNQ7Z5L7 613 aa19.45■□□□□ 0.7
LINC02396-204ENST00000552628 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
LINC02396-204ENST00000552628 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
LINC02396-204ENST00000552628 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
LINC02396-204ENST00000552628 NBPF9Q3BBW0 867 aa19.44■□□□□ 0.7
LINC02396-204ENST00000552628 XDHP47989 1333 aa19.44■□□□□ 0.7
LINC02396-204ENST00000552628 GPR25O00155 361 aa19.43■□□□□ 0.7
LINC02396-204ENST00000552628 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
LINC02396-204ENST00000552628 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
LINC02396-204ENST00000552628 PITPNM2Q9BZ72 1349 aa19.43■□□□□ 0.7
LINC02396-204ENST00000552628 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
LINC02396-204ENST00000552628 CWC25Q9NXE8 425 aaPredicted RBP19.42■□□□□ 0.7
LINC02396-204ENST00000552628 E9PSI1 815 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 VAMP4O75379 141 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 TM4SF4P48230 202 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 SREBF2Q12772 1141 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 ARMC9Q7Z3E5 817 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 MXD3Q9BW11 206 aa19.41■□□□□ 0.7
LINC02396-204ENST00000552628 FKTNO75072 461 aa19.4■□□□□ 0.7
LINC02396-204ENST00000552628 PCCAP05165 728 aaPredicted RBP19.4■□□□□ 0.7
LINC02396-204ENST00000552628 FBXO46Q6PJ61 603 aaPredicted RBP19.4■□□□□ 0.7
LINC02396-204ENST00000552628 GMLQ99445 158 aa19.4■□□□□ 0.7
LINC02396-204ENST00000552628 CDC5LQ99459 802 aaKnown RBP19.4■□□□□ 0.7
LINC02396-204ENST00000552628 COL4A1P02462 1669 aa19.4■□□□□ 0.7
LINC02396-204ENST00000552628 MIER1Q8N108 512 aa19.39■□□□□ 0.69
LINC02396-204ENST00000552628 SCN9AQ15858 1988 aa19.39■□□□□ 0.69
LINC02396-204ENST00000552628 TNRC18O15417 2968 aaPredicted RBP19.38■□□□□ 0.69
LINC02396-204ENST00000552628 KSR2Q6VAB6 950 aa19.38■□□□□ 0.69
LINC02396-204ENST00000552628 PDE4DIPQ5VU43 2346 aa19.37■□□□□ 0.69
LINC02396-204ENST00000552628 PAPPA2Q9BXP8 1791 aa19.37■□□□□ 0.69
LINC02396-204ENST00000552628 WTIPA6NIX2 430 aaPredicted RBP19.37■□□□□ 0.69
LINC02396-204ENST00000552628 WNT10BO00744 389 aa19.37■□□□□ 0.69
LINC02396-204ENST00000552628 SASH1O94885 1247 aa19.37■□□□□ 0.69
LINC02396-204ENST00000552628 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
LINC02396-204ENST00000552628 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
LINC02396-204ENST00000552628 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
LINC02396-204ENST00000552628 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
LINC02396-204ENST00000552628 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
LINC02396-204ENST00000552628 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
LINC02396-204ENST00000552628 MYO3BQ8WXR4 1341 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
LINC02396-204ENST00000552628 FLIIQ13045 1269 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 DACT2Q5SW24 774 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 TTLL5Q6EMB2 1281 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 TRMT2AQ8IZ69 625 aaKnown RBP19.35■□□□□ 0.69
LINC02396-204ENST00000552628 SLC10A4Q96EP9 437 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 MINPP1Q9UNW1 487 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 MAP3K2Q9Y2U5 619 aa19.35■□□□□ 0.69
LINC02396-204ENST00000552628 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 ALDH1A1P00352 501 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 CTSWP56202 376 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 STRIP1Q5VSL9 837 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 APOBEC3FQ8IUX4 373 aaKnown RBP19.34■□□□□ 0.69
LINC02396-204ENST00000552628 KIAA0825Q8IV33 1275 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 COA1Q9GZY4 146 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 R3HDMLQ9H3Y0 253 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 BSDC1Q9NW68 430 aaPredicted RBP19.34■□□□□ 0.69
LINC02396-204ENST00000552628 TRIM17Q9Y577 477 aa19.34■□□□□ 0.69
LINC02396-204ENST00000552628 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.68
LINC02396-204ENST00000552628 KCNJ4P48050 445 aa19.33■□□□□ 0.68
LINC02396-204ENST00000552628 NEXNQ0ZGT2 675 aa19.33■□□□□ 0.68
LINC02396-204ENST00000552628 G2E3Q7L622 706 aa19.33■□□□□ 0.68
LINC02396-204ENST00000552628 GREM2Q9H772 168 aa19.33■□□□□ 0.68
LINC02396-204ENST00000552628 GTF2IP78347 998 aa19.32■□□□□ 0.68
LINC02396-204ENST00000552628 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
LINC02396-204ENST00000552628 SPRYD7Q5W111 196 aa19.32■□□□□ 0.68
LINC02396-204ENST00000552628 TTLL11Q8NHH1 800 aa19.32■□□□□ 0.68
LINC02396-204ENST00000552628 FZD1Q9UP38 647 aa19.32■□□□□ 0.68
LINC02396-204ENST00000552628 ZNF609O15014 1411 aa19.32■□□□□ 0.68
LINC02396-204ENST00000552628 MED23Q9ULK4 1368 aa19.32■□□□□ 0.68
LINC02396-204ENST00000552628 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
LINC02396-204ENST00000552628 MPHOSPH8Q99549 860 aa19.31■□□□□ 0.68
LINC02396-204ENST00000552628 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
LINC02396-204ENST00000552628 MANSC4A6NHS7 340 aaPredicted RBP19.3■□□□□ 0.68
LINC02396-204ENST00000552628 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
LINC02396-204ENST00000552628 MMP14P50281 582 aa19.3■□□□□ 0.68
LINC02396-204ENST00000552628 INHBEP58166 350 aa19.3■□□□□ 0.68
LINC02396-204ENST00000552628 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
LINC02396-204ENST00000552628 DLGAP5Q15398 846 aa19.3■□□□□ 0.68
LINC02396-204ENST00000552628 ZNF804BA4D1E1 1349 aa19.29■□□□□ 0.68
LINC02396-204ENST00000552628 PPP1R12BO60237 982 aaPredicted RBP19.29■□□□□ 0.68
LINC02396-204ENST00000552628 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
LINC02396-204ENST00000552628 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
LINC02396-204ENST00000552628 DNAAF4Q8WXU2 420 aa19.29■□□□□ 0.68
LINC02396-204ENST00000552628 ANKRD2Q9GZV1 360 aa19.29■□□□□ 0.68
LINC02396-204ENST00000552628 MYH3P11055 1940 aa19.28■□□□□ 0.68
LINC02396-204ENST00000552628 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms