RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 ARID4AP29374 1257 aaPredicted RBP13.24□□□□□ -0.29
LINC00661-206ENST00000552608 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
LINC00661-206ENST00000552608 KBTBD3Q8NAB2 608 aa13.24□□□□□ -0.29
LINC00661-206ENST00000552608 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00661-206ENST00000552608 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
LINC00661-206ENST00000552608 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
LINC00661-206ENST00000552608 DLEC1Q9Y238 1755 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 H0YIN7 160 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 GOLIM4O00461 696 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
LINC00661-206ENST00000552608 POLD1P28340 1107 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 DOCK2Q92608 1830 aa13.23□□□□□ -0.29
LINC00661-206ENST00000552608 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
LINC00661-206ENST00000552608 SRGNP10124 158 aa13.22□□□□□ -0.29
LINC00661-206ENST00000552608 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
LINC00661-206ENST00000552608 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00661-206ENST00000552608 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
LINC00661-206ENST00000552608 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
LINC00661-206ENST00000552608 SP8Q8IXZ3 490 aa13.22□□□□□ -0.29
LINC00661-206ENST00000552608 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00661-206ENST00000552608 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.29
LINC00661-206ENST00000552608 SEMA3EO15041 775 aa13.21□□□□□ -0.29
LINC00661-206ENST00000552608 ZFYP08048 801 aaPredicted RBP13.21□□□□□ -0.29
LINC00661-206ENST00000552608 PHKA1P46020 1223 aa13.21□□□□□ -0.29
LINC00661-206ENST00000552608 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
LINC00661-206ENST00000552608 CNKSR1Q969H4 720 aa13.21□□□□□ -0.29
LINC00661-206ENST00000552608 MTFR1LQ9H019 292 aa13.21□□□□□ -0.29
LINC00661-206ENST00000552608 SGSM2O43147 1006 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 MCAMP43121 646 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 ZAP70P43403 619 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
LINC00661-206ENST00000552608 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
LINC00661-206ENST00000552608 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC00661-206ENST00000552608 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 PODXL2Q9NZ53 605 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 DENND2AQ9ULE3 1009 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 EP400Q96L91 3159 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
LINC00661-206ENST00000552608 CCDC88AQ3V6T2 1871 aa13.19□□□□□ -0.3
LINC00661-206ENST00000552608 ZBTB22O15209 634 aa13.19□□□□□ -0.3
LINC00661-206ENST00000552608 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
LINC00661-206ENST00000552608 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
LINC00661-206ENST00000552608 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
LINC00661-206ENST00000552608 BCAMP50895 628 aa13.19□□□□□ -0.3
LINC00661-206ENST00000552608 ZNF804AQ7Z570 1209 aa13.19□□□□□ -0.3
LINC00661-206ENST00000552608 EDC3Q96F86 508 aaKnown RBP13.19□□□□□ -0.3
LINC00661-206ENST00000552608 USP26Q9BXU7 913 aa13.19□□□□□ -0.3
LINC00661-206ENST00000552608 HELLSQ9NRZ9 838 aa13.19□□□□□ -0.3
LINC00661-206ENST00000552608 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
LINC00661-206ENST00000552608 GYG1P46976 350 aa13.18□□□□□ -0.3
LINC00661-206ENST00000552608 GPSM2P81274 684 aa13.18□□□□□ -0.3
LINC00661-206ENST00000552608 WASHC4Q2M389 1173 aa13.18□□□□□ -0.3
LINC00661-206ENST00000552608 C15orf52Q6ZUT6 534 aaKnown RBP13.18□□□□□ -0.3
LINC00661-206ENST00000552608 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
LINC00661-206ENST00000552608 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
LINC00661-206ENST00000552608 LTBP1Q14766 1721 aa13.18□□□□□ -0.3
LINC00661-206ENST00000552608 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
LINC00661-206ENST00000552608 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
LINC00661-206ENST00000552608 SNAP23O00161 211 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 IGSF3O75054 1194 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 UFL1O94874 794 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 RASGRF1Q13972 1273 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 SCARF1Q14162 830 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
LINC00661-206ENST00000552608 MCMDC2Q4G0Z9 681 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 MPNDQ8N594 471 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
LINC00661-206ENST00000552608 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 MAST2Q6P0Q8 1798 aa13.17□□□□□ -0.3
LINC00661-206ENST00000552608 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
LINC00661-206ENST00000552608 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
LINC00661-206ENST00000552608 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
LINC00661-206ENST00000552608 BECN1Q14457 450 aa13.16□□□□□ -0.3
LINC00661-206ENST00000552608 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
LINC00661-206ENST00000552608 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
LINC00661-206ENST00000552608 EYA3Q99504 573 aa13.16□□□□□ -0.3
LINC00661-206ENST00000552608 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
LINC00661-206ENST00000552608 ANTXR1Q9H6X2 564 aa13.16□□□□□ -0.3
LINC00661-206ENST00000552608 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
LINC00661-206ENST00000552608 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
LINC00661-206ENST00000552608 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
LINC00661-206ENST00000552608 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
LINC00661-206ENST00000552608 ANAPC15P60006 121 aa13.15□□□□□ -0.3
LINC00661-206ENST00000552608 UBE3CQ15386 1083 aa13.15□□□□□ -0.3
LINC00661-206ENST00000552608 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
LINC00661-206ENST00000552608 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
LINC00661-206ENST00000552608 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms