RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 HHIPL1Q96JK4 782 aa17.58■□□□□ 0.4
SMARCC2-212ENST00000552566 TAF1P21675 1872 aa17.58■□□□□ 0.4
SMARCC2-212ENST00000552566 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 SCARF1Q14162 830 aa17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 PODNQ7Z5L7 613 aa17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 C2orf69Q8N8R5 385 aa17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 GBA2Q9HCG7 927 aaPredicted RBP17.57■□□□□ 0.4
SMARCC2-212ENST00000552566 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
SMARCC2-212ENST00000552566 ITGA6P23229 1130 aa17.56■□□□□ 0.4
SMARCC2-212ENST00000552566 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
SMARCC2-212ENST00000552566 LINS1Q8NG48 757 aa17.56■□□□□ 0.4
SMARCC2-212ENST00000552566 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
SMARCC2-212ENST00000552566 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
SMARCC2-212ENST00000552566 ZNF280AP59817 542 aaPredicted RBP17.55■□□□□ 0.4
SMARCC2-212ENST00000552566 ANGEL2Q5VTE6 544 aaKnown RBP17.55■□□□□ 0.4
SMARCC2-212ENST00000552566 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
SMARCC2-212ENST00000552566 MXD3Q9BW11 206 aa17.55■□□□□ 0.4
SMARCC2-212ENST00000552566 F6X3S4 739 aa17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 KCNJ4P48050 445 aa17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 NOGQ13253 232 aa17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 ZIC5Q96T25 663 aa17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 MYOZ2Q9NPC6 264 aa17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
SMARCC2-212ENST00000552566 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 BCAR3O75815 825 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 ZNF157P51786 506 aaPredicted RBP17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 CASP7P55210 303 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 RGMBQ6NW40 437 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 CDCA5Q96FF9 252 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 GMLQ99445 158 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 ANKRD2Q9GZV1 360 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 LEMD3Q9Y2U8 911 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 CHMP3Q9Y3E7 222 aa17.53■□□□□ 0.4
SMARCC2-212ENST00000552566 ZNF804BA4D1E1 1349 aa17.52■□□□□ 0.4
SMARCC2-212ENST00000552566 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.4
SMARCC2-212ENST00000552566 CA12O43570 354 aa17.52■□□□□ 0.4
SMARCC2-212ENST00000552566 MS4A1P11836 297 aa17.52■□□□□ 0.4
SMARCC2-212ENST00000552566 COA1Q9GZY4 146 aa17.52■□□□□ 0.4
SMARCC2-212ENST00000552566 SCAF8Q9UPN6 1271 aaKnown RBP17.52■□□□□ 0.4
SMARCC2-212ENST00000552566 CSF1RP07333 972 aa17.51■□□□□ 0.39
SMARCC2-212ENST00000552566 KLRK1P26718 216 aa17.51■□□□□ 0.39
SMARCC2-212ENST00000552566 DACT2Q5SW24 774 aa17.51■□□□□ 0.39
SMARCC2-212ENST00000552566 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
SMARCC2-212ENST00000552566 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
SMARCC2-212ENST00000552566 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
SMARCC2-212ENST00000552566 NEFLP07196 543 aa17.5■□□□□ 0.39
SMARCC2-212ENST00000552566 CHRNDQ07001 517 aa17.5■□□□□ 0.39
SMARCC2-212ENST00000552566 BEND3Q5T5X7 828 aa17.5■□□□□ 0.39
SMARCC2-212ENST00000552566 CCDC102AQ96A19 550 aa17.5■□□□□ 0.39
SMARCC2-212ENST00000552566 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 ZKSCAN2Q63HK3 967 aa17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 HELBQ8NG08 1087 aaPredicted RBP17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
SMARCC2-212ENST00000552566 FAM155AB1AL88 458 aaPredicted RBP17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 SNAP23O00161 211 aa17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 TAF5LO75529 589 aa17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 GTF2IP78347 998 aa17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 FOXO4P98177 505 aa17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 PRAMEF18Q5VWM3 479 aa17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
SMARCC2-212ENST00000552566 PTPRCP08575 1304 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 MYO3BQ8WXR4 1341 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 ZNF609O15014 1411 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 SASH1O94885 1247 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 TAF7LQ5H9L4 462 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 KIAA0825Q8IV33 1275 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
SMARCC2-212ENST00000552566 CCDC85CA6NKD9 419 aa17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 PLIN1O60240 522 aa17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 TTLL12Q14166 644 aaPredicted RBP17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 FTSJ3Q8IY81 847 aaKnown RBP17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 HDAC9Q9UKV0 1011 aa17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
SMARCC2-212ENST00000552566 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.38
SMARCC2-212ENST00000552566 GRM8O00222 908 aa17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 WNT10BO00744 389 aa17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 SLC10A3P09131 477 aa17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 EPHA10Q5JZY3 1008 aa17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 CD209Q9NNX6 404 aa17.45■□□□□ 0.38
SMARCC2-212ENST00000552566 UBE2Q2LH0YL09 131 aa17.44■□□□□ 0.38
SMARCC2-212ENST00000552566 TRPA1O75762 1119 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms