RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-210ENST00000551981 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
CHMP1A-210ENST00000551981 HDAC9Q9UKV0 1011 aa18.26■□□□□ 0.51
CHMP1A-210ENST00000551981 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 MMP14P50281 582 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 MOB2Q70IA6 237 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 MINPP1Q9UNW1 487 aa18.25■□□□□ 0.51
CHMP1A-210ENST00000551981 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 DACT2Q5SW24 774 aa18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 STRIP1Q5VSL9 837 aa18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 SCAF8Q9UPN6 1271 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
CHMP1A-210ENST00000551981 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-210ENST00000551981 GREM2Q9H772 168 aa18.23■□□□□ 0.51
CHMP1A-210ENST00000551981 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 WNT10BO00744 389 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 IGKV5-2P06315 115 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 IGHMBP2P38935 993 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 TM4SF4P48230 202 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 SREBF2Q12772 1141 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 ZNF296Q8WUU4 475 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 STK31Q9BXU1 1019 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
CHMP1A-210ENST00000551981 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-210ENST00000551981 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-210ENST00000551981 ARMC9Q7Z3E5 817 aa18.21■□□□□ 0.51
CHMP1A-210ENST00000551981 APOBEC3FQ8IUX4 373 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-210ENST00000551981 MXD3Q9BW11 206 aa18.21■□□□□ 0.51
CHMP1A-210ENST00000551981 SASH1O94885 1247 aa18.2■□□□□ 0.5
CHMP1A-210ENST00000551981 PRPF38BQ5VTL8 546 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-210ENST00000551981 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
CHMP1A-210ENST00000551981 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-210ENST00000551981 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
CHMP1A-210ENST00000551981 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 GPR25O00155 361 aa18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 TTLL5Q6EMB2 1281 aa18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
CHMP1A-210ENST00000551981 KCNJ4P48050 445 aa18.17■□□□□ 0.5
CHMP1A-210ENST00000551981 TXNRD3Q86VQ6 643 aa18.17■□□□□ 0.5
CHMP1A-210ENST00000551981 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
CHMP1A-210ENST00000551981 COL1A1P02452 1464 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-210ENST00000551981 H7C1W4 665 aa18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 FKTNO75072 461 aa18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 ALDH1A1P00352 501 aa18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 ITGA6P23229 1130 aa18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 PRKG1Q13976 671 aa18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 FBXO46Q6PJ61 603 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 CFHR5Q9BXR6 569 aa18.16■□□□□ 0.5
CHMP1A-210ENST00000551981 GTF2IP78347 998 aa18.15■□□□□ 0.5
CHMP1A-210ENST00000551981 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-210ENST00000551981 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
CHMP1A-210ENST00000551981 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
CHMP1A-210ENST00000551981 ANGEL1Q9UNK9 670 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-210ENST00000551981 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 KLRK1P26718 216 aa18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 GCKRQ14397 625 aa18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 LDLRAD1Q5T700 205 aa18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 ECM29Q5VYK3 1845 aa18.14■□□□□ 0.49
CHMP1A-210ENST00000551981 INHBEP58166 350 aa18.13■□□□□ 0.49
CHMP1A-210ENST00000551981 DLGAP5Q15398 846 aa18.13■□□□□ 0.49
CHMP1A-210ENST00000551981 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-210ENST00000551981 DEFB129Q9H1M3 183 aa18.13■□□□□ 0.49
CHMP1A-210ENST00000551981 CACNA1FO60840 1977 aa18.12■□□□□ 0.49
CHMP1A-210ENST00000551981 MANSC4A6NHS7 340 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-210ENST00000551981 CHRNDQ07001 517 aa18.12■□□□□ 0.49
CHMP1A-210ENST00000551981 G2E3Q7L622 706 aa18.12■□□□□ 0.49
CHMP1A-210ENST00000551981 SLC10A4Q96EP9 437 aa18.12■□□□□ 0.49
CHMP1A-210ENST00000551981 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
CHMP1A-210ENST00000551981 ANKRD18BA2A2Z9 1011 aa18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 MYO1BO43795 1136 aa18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 PPP1R12BO60237 982 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 CSF1RP07333 972 aa18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 ZBTB48P10074 688 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 MTMR14Q8NCE2 650 aa18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
CHMP1A-210ENST00000551981 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
CHMP1A-210ENST00000551981 FLIIQ13045 1269 aa18.1■□□□□ 0.49
CHMP1A-210ENST00000551981 FKBP5Q13451 457 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-210ENST00000551981 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
CHMP1A-210ENST00000551981 LINS1Q8NG48 757 aa18.1■□□□□ 0.49
CHMP1A-210ENST00000551981 DNAAF4Q8WXU2 420 aa18.1■□□□□ 0.49
CHMP1A-210ENST00000551981 LAMB1P07942 1786 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 CASP7P55210 303 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms