RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	SPEF2	Q9C093	1822 aa		13.74	□□□□□ -0.21
PFKM-223	ENST00000551485	MYO3B	Q8WXR4	1341 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	MYH3	P11055	1940 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	WTIP	A6NIX2	430 aa	Predicted RBP	13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	WNT10B	O00744	389 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	NF2	P35240	595 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	OGFOD1	Q8N543	542 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	MXD3	Q9BW11	206 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	IFT57	Q9NWB7	429 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	MINPP1	Q9UNW1	487 aa		13.73	□□□□□ -0.21
PFKM-223	ENST00000551485	ELL2	O00472	640 aa	Predicted RBP	13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	DDX58	O95786	925 aa	Known RBP	13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	SREBF2	Q12772	1141 aa		13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	MKRN3	Q13064	507 aa	Known RBP	13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	STRIP1	Q5VSL9	837 aa		13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	FBXW7	Q969H0	707 aa		13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	CFHR5	Q9BXR6	569 aa		13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	BSDC1	Q9NW68	430 aa	Predicted RBP	13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	HTT	P42858	3142 aa		13.72	□□□□□ -0.21
PFKM-223	ENST00000551485	SASH1	O94885	1247 aa		13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	CCT4	P50991	539 aa	Known RBP	13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	GNAI1	P63096	354 aa		13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	ARMC9	Q7Z3E5	817 aa		13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	TTLL11	Q8NHH1	800 aa		13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	COA1	Q9GZY4	146 aa		13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	GREM2	Q9H772	168 aa		13.71	□□□□□ -0.21
PFKM-223	ENST00000551485	MKI67	P46013	3256 aa	Known RBP	13.71	□□□□□ -0.22
PFKM-223	ENST00000551485	FKTN	O75072	461 aa		13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	IGKV5-2	P06315	115 aa		13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	MMP14	P50281	582 aa		13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	PTPN12	Q05209	780 aa	Known RBP	13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	CALD1	Q05682	793 aa	Known RBP	13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	CCDC30	Q5VVM6	783 aa		13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	C8orf58	Q8NAV2	365 aa		13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	MAP3K2	Q9Y2U5	619 aa		13.7	□□□□□ -0.22
PFKM-223	ENST00000551485	TXNRD3	Q86VQ6	643 aa		13.69	□□□□□ -0.22
PFKM-223	ENST00000551485	R3HDML	Q9H3Y0	253 aa		13.69	□□□□□ -0.22
PFKM-223	ENST00000551485	LEMD3	Q9Y2U8	911 aa		13.69	□□□□□ -0.22
PFKM-223	ENST00000551485	COL1A1	P02452	1464 aa	Predicted RBP	13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	PRKG1	Q13976	671 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	LDLRAD1	Q5T700	205 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	SPRYD7	Q5W111	196 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	TTLL5	Q6EMB2	1281 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	KSR2	Q6VAB6	950 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	KIAA0825	Q8IV33	1275 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	ZBED3	Q96IU2	234 aa	Predicted RBP	13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	CHMP4A	Q9BY43	222 aa		13.68	□□□□□ -0.22
PFKM-223	ENST00000551485	PI4KAP2	A4QPH2	592 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	APAF1	O14727	1248 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	ALDH1A1	P00352	501 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	KLRK1	P26718	216 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	IGHMBP2	P38935	993 aa	Known RBP	13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	NEXN	Q0ZGT2	675 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	PI4KAP1	Q8N8J0	262 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	ANGEL1	Q9UNK9	670 aa	Known RBP	13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	CENPF	P49454	3210 aa		13.67	□□□□□ -0.22
PFKM-223	ENST00000551485	ZNF804B	A4D1E1	1349 aa		13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	KIAA0100	Q14667	2235 aa	Known RBP	13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	NEURL1B	A8MQ27	555 aa		13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	DDX10	Q13206	875 aa	Known RBP	13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	TSPYL6	Q8N831	410 aa		13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	GCC1	Q96CN9	775 aa		13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	LAMB1	P07942	1786 aa		13.66	□□□□□ -0.22
PFKM-223	ENST00000551485	MANSC4	A6NHS7	340 aa	Predicted RBP	13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	GTF2I	P78347	998 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	MAP3K11	Q16584	847 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	CWF19L2	Q2TBE0	894 aa	Known RBP	13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	UBE3B	Q7Z3V4	1068 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	ANKRD2	Q9GZV1	360 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	DEFB129	Q9H1M3	183 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	FZD1	Q9UP38	647 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	TRIM17	Q9Y577	477 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485	SSC5D	A1L4H1	1573 aa		13.65	□□□□□ -0.22
PFKM-223	ENST00000551485		H7C1W4	665 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	ITGA6	P23229	1130 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	INHBE	P58166	350 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	DLGAP5	Q15398	846 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	IFNL1	Q8IU54	200 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	SLC10A4	Q96EP9	437 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	WNK4	Q96J92	1243 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	MPHOSPH8	Q99549	860 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	PLA2G12B	Q9BX93	195 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	ECM29	Q5VYK3	1845 aa		13.64	□□□□□ -0.23
PFKM-223	ENST00000551485	BRCA2	P51587	3418 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	ZBTB48	P10074	688 aa	Predicted RBP	13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	KCNJ4	P48050	445 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	OTOP1	Q7RTM1	612 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	MTMR14	Q8NCE2	650 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	CLMN	Q96JQ2	1002 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	STK31	Q9BXU1	1019 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	CD209	Q9NNX6	404 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	PPP2R3B	Q9Y5P8	575 aa		13.63	□□□□□ -0.23
PFKM-223	ENST00000551485	POTEF	A5A3E0	1075 aa		13.62	□□□□□ -0.23
PFKM-223	ENST00000551485	PPP1R12B	O60237	982 aa	Predicted RBP	13.62	□□□□□ -0.23
PFKM-223	ENST00000551485	CHRND	Q07001	517 aa		13.62	□□□□□ -0.23
PFKM-223	ENST00000551485	INTS3	Q68E01	1043 aa	Known RBP	13.62	□□□□□ -0.23
PFKM-223	ENST00000551485	CERS5	Q8N5B7	392 aa		13.62	□□□□□ -0.23

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