RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
LETMD1-229ENST00000551261 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
LETMD1-229ENST00000551261 KCNJ4P48050 445 aa17.19■□□□□ 0.34
LETMD1-229ENST00000551261 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
LETMD1-229ENST00000551261 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.19■□□□□ 0.34
LETMD1-229ENST00000551261 COL4A1P02462 1669 aa17.19■□□□□ 0.34
LETMD1-229ENST00000551261 SRGNP10124 158 aa17.18■□□□□ 0.34
LETMD1-229ENST00000551261 ADORA1P30542 326 aa17.18■□□□□ 0.34
LETMD1-229ENST00000551261 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
LETMD1-229ENST00000551261 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
LETMD1-229ENST00000551261 MASTLQ96GX5 879 aa17.18■□□□□ 0.34
LETMD1-229ENST00000551261 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
LETMD1-229ENST00000551261 C10orf71Q711Q0 1435 aa17.18■□□□□ 0.34
LETMD1-229ENST00000551261 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-229ENST00000551261 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-229ENST00000551261 ANAPC15P60006 121 aa17.17■□□□□ 0.34
LETMD1-229ENST00000551261 STYK1Q6J9G0 422 aa17.17■□□□□ 0.34
LETMD1-229ENST00000551261 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
LETMD1-229ENST00000551261 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 GOLIM4O00461 696 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 TAF5LO75529 589 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
LETMD1-229ENST00000551261 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
LETMD1-229ENST00000551261 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-229ENST00000551261 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 LTBP1Q14766 1721 aa17.15■□□□□ 0.34
LETMD1-229ENST00000551261 TAF1P21675 1872 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 MYH7P12883 1935 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 H0YIN7 160 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 MCAMP43121 646 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 PHKA1P46020 1223 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.33
LETMD1-229ENST00000551261 BECN1Q14457 450 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 CWC27Q6UX04 472 aaKnown RBP17.14■□□□□ 0.33
LETMD1-229ENST00000551261 IL17RAQ96F46 866 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
LETMD1-229ENST00000551261 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
LETMD1-229ENST00000551261 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
LETMD1-229ENST00000551261 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
LETMD1-229ENST00000551261 ZAP70P43403 619 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 NMIQ13287 307 aaPredicted RBP17.12■□□□□ 0.33
LETMD1-229ENST00000551261 RASGRF1Q13972 1273 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 HMG20BQ9P0W2 317 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
LETMD1-229ENST00000551261 MAST2Q6P0Q8 1798 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 POLD1P28340 1107 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
LETMD1-229ENST00000551261 RABEP1Q15276 862 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 UBE3CQ15386 1083 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 ZMYM1Q5SVZ6 1142 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
LETMD1-229ENST00000551261 APPBP2Q92624 585 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
LETMD1-229ENST00000551261 IRS2Q9Y4H2 1338 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 MYH13Q9UKX3 1938 aa17.11■□□□□ 0.33
LETMD1-229ENST00000551261 SCARF1Q14162 830 aa17.1■□□□□ 0.33
LETMD1-229ENST00000551261 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
LETMD1-229ENST00000551261 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
LETMD1-229ENST00000551261 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
LETMD1-229ENST00000551261 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
LETMD1-229ENST00000551261 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-229ENST00000551261 HSPA4P34932 840 aa17.09■□□□□ 0.33
LETMD1-229ENST00000551261 BCAMP50895 628 aa17.09■□□□□ 0.33
LETMD1-229ENST00000551261 WASHC4Q2M389 1173 aa17.09■□□□□ 0.33
LETMD1-229ENST00000551261 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
LETMD1-229ENST00000551261 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-229ENST00000551261 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
LETMD1-229ENST00000551261 UFL1O94874 794 aa17.08■□□□□ 0.32
LETMD1-229ENST00000551261 ADD2P35612 726 aa17.08■□□□□ 0.32
LETMD1-229ENST00000551261 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
LETMD1-229ENST00000551261 EYA3Q99504 573 aa17.08■□□□□ 0.32
LETMD1-229ENST00000551261 NSFL1CQ9UNZ2 370 aaKnown RBP17.08■□□□□ 0.32
LETMD1-229ENST00000551261 ZKSCAN1P17029 563 aaPredicted RBP17.07■□□□□ 0.32
LETMD1-229ENST00000551261 GYG1P46976 350 aa17.07■□□□□ 0.32
LETMD1-229ENST00000551261 GPSM2P81274 684 aa17.07■□□□□ 0.32
LETMD1-229ENST00000551261 SPTY2D1Q68D10 685 aaPredicted RBP17.07■□□□□ 0.32
LETMD1-229ENST00000551261 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
LETMD1-229ENST00000551261 SNX21Q969T3 373 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms