RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ZBTB40Q9NUA8 1239 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 ZNF358Q9NW07 568 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 PSD3Q9NYI0 1048 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 GMPR2Q9P2T1 348 aaKnown RBP6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 SYNJ2O15056 1496 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 NOS1P29475 1434 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 ADGBQ8N7X0 1667 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CFAP65Q6ZU64 1925 aaKnown RBP6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 ATAD2Q6PL18 1390 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 RNF17Q9BXT8 1623 aaKnown RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 WDR62O43379 1518 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 CCDC189A1A4V9 331 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 ATP8B1O43520 1251 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 RPS6KA5O75582 802 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 ZRANB2O95218 330 aaKnown RBP eCLIP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 PTMAP06454 111 aaKnown RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 CCDC172P0C7W6 258 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 BMP2P12643 396 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 PLA2G4AP47712 749 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 GTF2A1P52655 376 aaPredicted RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SATB1Q01826 763 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 PSME1Q06323 249 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 DPYDQ12882 1025 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 CHAF1AQ13111 956 aaPredicted RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SCARF1Q14162 830 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 LARP1Q6PKG0 1096 aaKnown RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 RPAINQ86UA6 219 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 EGFL6Q8IUX8 553 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 ANKMY2Q8IV38 441 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 ZNF295-AS1Q8N0V1 137 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 RNF217Q8TC41 542 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 STK32AQ8WU08 396 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SYAP1Q96A49 352 aaPredicted RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 CHMP4CQ96CF2 233 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SLC4A9Q96Q91 983 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 ESF1Q9H501 851 aaKnown RBP6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 FHOD1Q9Y613 1164 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 MYOM2P54296 1465 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 PLA2R1Q13018 1463 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 SHANK2Q9UPX8 1470 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
LSM3P2-201ENST00000551246 PIK3R4Q99570 1358 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 PLEKHG2Q9H7P9 1386 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 MED14O60244 1454 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 A2MP01023 1474 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 POTECB2RU33 542 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 M0R2N6 131 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 MYO1CO00159 1063 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 KIF1CO43896 1103 aaKnown RBP6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 UPP2O95045 317 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 GPC1P35052 558 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 RNF144AP50876 292 aaPredicted RBP6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 LMOD3Q0VAK6 560 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 MTFR1Q15390 333 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 ESCO1Q5FWF5 840 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 ZKSCAN2Q63HK3 967 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 CHD1LQ86WJ1 897 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 DZIP1LQ8IYY4 767 aaKnown RBP6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 TXLNBQ8N3L3 684 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 ERO1AQ96HE7 468 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 USP26Q9BXU7 913 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 L2HGDHQ9H9P8 463 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 MED4Q9NPJ6 270 aa6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 NOVA2Q9UNW9 492 aaKnown RBP6.31□□□□□ -1.4
LSM3P2-201ENST00000551246 ADGRL1O94910 1474 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 TTLL8A6PVC2 850 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 MEN1O00255 615 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 ATP2B1P20020 1258 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 TMF1P82094 1093 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 FAM69CQ0P6D2 419 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 BMS1Q14692 1282 aaKnown RBP6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 NAA30Q147X3 362 aaPredicted RBP6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 TMEM164Q5U3C3 297 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 FBXO38Q6PIJ6 1188 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 SYT10Q6XYQ8 523 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 AEBP1Q8IUX7 1158 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 FBXO18Q8NFZ0 1043 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 ZBTB9Q96C00 473 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 INTS4Q96HW7 963 aaKnown RBP6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 TRIM47Q96LD4 638 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 NOL10Q9BSC4 688 aaKnown RBP6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 GRIP2Q9C0E4 1043 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 SERTAD1Q9UHV2 236 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 DNMT3LQ9UJW3 386 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 DDX19BQ9UMR2 479 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 USP3Q9Y6I4 520 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 RTL1A6NKG5 1358 aa6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 RPAP1Q9BWH6 1393 aaPredicted RBP6.3□□□□□ -1.4
LSM3P2-201ENST00000551246 EIF2AK4Q9P2K8 1649 aaKnown RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 CDC45O75419 566 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 MX1P20591 662 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 SMTNP53814 917 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms