RNA–Protein interactions for RNA: ENST00000551041.6

RPL6-209, Transcript of ribosomal protein L6, human

TSL 2

Gene RPL6, Length 1,082 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL6-209	ENST00000551041	CCDC88A	Q3V6T2	1871 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	C3orf80	F5H4A9	247 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	TCERG1	O14776	1098 aa	Known RBP	13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	VAMP4	O75379	141 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	DDX58	O95786	925 aa	Known RBP	13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	LAPTM4B	Q86VI4	370 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	ANKK1	Q8NFD2	765 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	ZNF428	Q96B54	188 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	FAM89A	Q96GI7	184 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	METTL22	Q9BUU2	404 aa	Predicted RBP	13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	STK31	Q9BXU1	1019 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	TSKS	Q9UJT2	592 aa		13.74	□□□□□ -0.21
RPL6-209	ENST00000551041	EXOSC9	Q06265	439 aa	Known RBP	13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	GRIPAP1	Q4V328	841 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	KSR2	Q6VAB6	950 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	PSMD1	Q99460	953 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	MYD88	Q99836	296 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	RRAGC	Q9HB90	399 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	WBP1L	Q9NX94	342 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	FAM198A	Q9UFP1	575 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	SNED1	Q8TER0	1413 aa		13.73	□□□□□ -0.21
RPL6-209	ENST00000551041	ABCC4	O15439	1325 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	ZNF521	Q96K83	1311 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	PPEF1	O14829	653 aa	Predicted RBP	13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	BBOX1	O75936	387 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	TOMM70	O94826	608 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	G2E3	Q7L622	706 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	CCDC191	Q8NCU4	936 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	MYH16	Q9H6N6	1097 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	MAP3K2	Q9Y2U5	619 aa		13.72	□□□□□ -0.21
RPL6-209	ENST00000551041	DICER1	Q9UPY3	1922 aa	Known RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	PI4KAP2	A4QPH2	592 aa		13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	CCER2	I3L3R5	266 aa		13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	IRS4	O14654	1257 aa	Predicted RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	ZMYND10	O75800	440 aa		13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	ITGBL1	O95965	494 aa	Predicted RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	SF3B3	Q15393	1217 aa	Known RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	RBM26	Q5T8P6	1007 aa	Known RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	DDX46	Q7L014	1031 aa	Known RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	PI4KAP1	Q8N8J0	262 aa		13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	ATP6V0A2	Q9Y487	856 aa		13.71	□□□□□ -0.21
RPL6-209	ENST00000551041	PCCA	P05165	728 aa	Predicted RBP	13.7	□□□□□ -0.22
RPL6-209	ENST00000551041	IARS	P41252	1262 aa	Known RBP	13.7	□□□□□ -0.22
RPL6-209	ENST00000551041	RTL5	Q5HYW3	569 aa	Predicted RBP	13.7	□□□□□ -0.22
RPL6-209	ENST00000551041	SLC51A	Q86UW1	340 aa		13.7	□□□□□ -0.22
RPL6-209	ENST00000551041	SP8	Q8IXZ3	490 aa		13.7	□□□□□ -0.22
RPL6-209	ENST00000551041	CWC25	Q9NXE8	425 aa	Predicted RBP	13.7	□□□□□ -0.22
RPL6-209	ENST00000551041	POTEC	B2RU33	542 aa		13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	IGKV5-2	P06315	115 aa		13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	VEGFA	P15692	232 aa	Predicted RBP	13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	FLII	Q13045	1269 aa		13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	GRAP	Q13588	217 aa		13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	RBM46	Q8TBY0	533 aa	Known RBP	13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	GRAPL	Q8TC17	118 aa	Predicted RBP	13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	TIAM2	Q8IVF5	1701 aa		13.69	□□□□□ -0.22
RPL6-209	ENST00000551041	LAMB2	P55268	1798 aa		13.68	□□□□□ -0.22
RPL6-209	ENST00000551041	DDN	O94850	711 aa	Predicted RBP	13.68	□□□□□ -0.22
RPL6-209	ENST00000551041	HSP90B1	P14625	803 aa	Known RBP	13.68	□□□□□ -0.22
RPL6-209	ENST00000551041	GPIHBP1	Q8IV16	184 aa		13.68	□□□□□ -0.22
RPL6-209	ENST00000551041	TMX4	Q9H1E5	349 aa	Predicted RBP	13.68	□□□□□ -0.22
RPL6-209	ENST00000551041	DDX60	Q8IY21	1712 aa	Known RBP	13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	FZD9	O00144	591 aa		13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	HSPA6	P17066	643 aa		13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	OSBP	P22059	807 aa		13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	NEXN	Q0ZGT2	675 aa		13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	TMC4	Q7Z404	712 aa		13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	JARID2	Q92833	1246 aa	Predicted RBP	13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.67	□□□□□ -0.22
RPL6-209	ENST00000551041	NEURL1B	A8MQ27	555 aa		13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	PDE8A	O60658	829 aa		13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	FKBP5	Q13451	457 aa	Predicted RBP	13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	MPND	Q8N594	471 aa		13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	JDP2	Q8WYK2	163 aa		13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	CELF1	Q92879	486 aa	Known RBP	13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	VPS33B	Q9H267	617 aa		13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	WDR90	Q96KV7	1748 aa		13.66	□□□□□ -0.22
RPL6-209	ENST00000551041	CDHR2	Q9BYE9	1310 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	ZNF541	Q9H0D2	1346 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041		E9PSI1	815 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041		H7C1W4	665 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	MAP3K7	O43318	606 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	RPS8	P62241	208 aa	Known RBP	13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	FSTL1	Q12841	308 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	CWF19L2	Q2TBE0	894 aa	Known RBP	13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	DPP8	Q6V1X1	898 aa	Predicted RBP	13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	LARGE2	Q8N3Y3	721 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	SUPT20H	Q8NEM7	779 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	DNAAF4	Q8WXU2	420 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	CACNA1F	O60840	1977 aa		13.65	□□□□□ -0.22
RPL6-209	ENST00000551041	GRXCR2	A6NFK2	248 aa		13.64	□□□□□ -0.23
RPL6-209	ENST00000551041	SLFN5	Q08AF3	891 aa		13.64	□□□□□ -0.23
RPL6-209	ENST00000551041	CCDC152	Q4G0S7	254 aa		13.64	□□□□□ -0.23
RPL6-209	ENST00000551041	SEC31B	Q9NQW1	1179 aa		13.64	□□□□□ -0.23
RPL6-209	ENST00000551041	TAF1	P21675	1872 aa		13.63	□□□□□ -0.23
RPL6-209	ENST00000551041	COL4A5	P29400	1685 aa		13.63	□□□□□ -0.23
RPL6-209	ENST00000551041	PPIP5K2	O43314	1243 aa		13.63	□□□□□ -0.23
RPL6-209	ENST00000551041	GCKR	Q14397	625 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms