RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 USP50Q70EL3 339 aaPredicted RBP12.44□□□□□ -0.42
PFDN5-213ENST00000550964 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
PFDN5-213ENST00000550964 SMC1BQ8NDV3 1235 aa12.44□□□□□ -0.42
PFDN5-213ENST00000550964 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
PFDN5-213ENST00000550964 MYH13Q9UKX3 1938 aa12.44□□□□□ -0.42
PFDN5-213ENST00000550964 ZNF609O15014 1411 aa12.44□□□□□ -0.42
PFDN5-213ENST00000550964 PLIN1O60240 522 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 SLC5A1P13866 664 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 ATP8B2P98198 1209 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 STRIP1Q5VSL9 837 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 LPIN2Q92539 896 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 DBNDD1Q9H9R9 158 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
PFDN5-213ENST00000550964 GNL3LQ9NVN8 582 aaKnown RBP12.43□□□□□ -0.42
PFDN5-213ENST00000550964 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
PFDN5-213ENST00000550964 KIF3CO14782 793 aa12.42□□□□□ -0.42
PFDN5-213ENST00000550964 TAF5LO75529 589 aa12.42□□□□□ -0.42
PFDN5-213ENST00000550964 VIL1P09327 827 aaKnown RBP12.42□□□□□ -0.42
PFDN5-213ENST00000550964 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
PFDN5-213ENST00000550964 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-213ENST00000550964 FKBP1AP62942 108 aaKnown RBP12.42□□□□□ -0.42
PFDN5-213ENST00000550964 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
PFDN5-213ENST00000550964 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
PFDN5-213ENST00000550964 ADARB2Q9NS39 739 aaKnown RBP12.42□□□□□ -0.42
PFDN5-213ENST00000550964 HDAC9Q9UKV0 1011 aa12.42□□□□□ -0.42
PFDN5-213ENST00000550964 FRAT2O75474 233 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-213ENST00000550964 RAD17O75943 681 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 IL1R1P14778 569 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 EPHX2P34913 555 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 ZC3H15Q8WU90 426 aaKnown RBP12.41□□□□□ -0.42
PFDN5-213ENST00000550964 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-213ENST00000550964 CD209Q9NNX6 404 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 GPRC5DQ9NZD1 345 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 COL4A1P02462 1669 aa12.41□□□□□ -0.42
PFDN5-213ENST00000550964 PSMD14O00487 310 aa12.4□□□□□ -0.42
PFDN5-213ENST00000550964 SEMA3EO15041 775 aa12.4□□□□□ -0.42
PFDN5-213ENST00000550964 ZBTB22O15209 634 aa12.4□□□□□ -0.42
PFDN5-213ENST00000550964 SASH1O94885 1247 aa12.4□□□□□ -0.42
PFDN5-213ENST00000550964 RLBP1P12271 317 aa12.4□□□□□ -0.42
PFDN5-213ENST00000550964 C1QTNF8P60827 252 aa12.4□□□□□ -0.42
PFDN5-213ENST00000550964 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-213ENST00000550964 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-213ENST00000550964 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-213ENST00000550964 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 YDJCA8MPS7 323 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
PFDN5-213ENST00000550964 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 LRRC24Q50LG9 513 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 PUS3Q9BZE2 481 aaKnown RBP12.39□□□□□ -0.43
PFDN5-213ENST00000550964 SIL1Q9H173 461 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 ZBTB40Q9NUA8 1239 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 CNOT7Q9UIV1 285 aaKnown RBP12.39□□□□□ -0.43
PFDN5-213ENST00000550964 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
PFDN5-213ENST00000550964 COL4A5P29400 1685 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 IGSF3O75054 1194 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 SURF6O75683 361 aaKnown RBP12.38□□□□□ -0.43
PFDN5-213ENST00000550964 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 SCNN1DP51172 638 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
PFDN5-213ENST00000550964 POLA2Q14181 598 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
PFDN5-213ENST00000550964 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
PFDN5-213ENST00000550964 SUGT1Q9Y2Z0 365 aa12.38□□□□□ -0.43
PFDN5-213ENST00000550964 MAST3O60307 1309 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 FAM205AQ6ZU69 1335 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 ARAP2Q8WZ64 1704 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 POTECB2RU33 542 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 FGFR2P21802 821 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 EAPPQ56P03 285 aaPredicted RBP12.37□□□□□ -0.43
PFDN5-213ENST00000550964 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 TDRD7Q8NHU6 1098 aaKnown RBP12.37□□□□□ -0.43
PFDN5-213ENST00000550964 KLHDC4Q8TBB5 520 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
PFDN5-213ENST00000550964 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
PFDN5-213ENST00000550964 PNMA6EA0A0J9YXQ4 647 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 MYO1BO43795 1136 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 GTF2IP78347 998 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 DACT2Q5SW24 774 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
PFDN5-213ENST00000550964 DENND2AQ9ULE3 1009 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
PFDN5-213ENST00000550964 ECM29Q5VYK3 1845 aa12.35□□□□□ -0.43
PFDN5-213ENST00000550964 EPS15P42566 896 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms