RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
RAB5C-207ENST00000550504 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
RAB5C-207ENST00000550504 GPATCH3Q96I76 525 aa12.61□□□□□ -0.39
RAB5C-207ENST00000550504 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
RAB5C-207ENST00000550504 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
RAB5C-207ENST00000550504 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
RAB5C-207ENST00000550504 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
RAB5C-207ENST00000550504 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
RAB5C-207ENST00000550504 SALL3Q9BXA9 1300 aa12.61□□□□□ -0.39
RAB5C-207ENST00000550504 PDE1AP54750 535 aa12.6□□□□□ -0.39
RAB5C-207ENST00000550504 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
RAB5C-207ENST00000550504 ECHDC1Q9NTX5 307 aa12.6□□□□□ -0.39
RAB5C-207ENST00000550504 POLLQ9UGP5 575 aa12.6□□□□□ -0.39
RAB5C-207ENST00000550504 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 GYG1P46976 350 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 BCAMP50895 628 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 CCDC93Q567U6 631 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 TTC39AQ5SRH9 613 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 STAP2Q9UGK3 403 aa12.59□□□□□ -0.39
RAB5C-207ENST00000550504 RIMBP2O15034 1052 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 PHKA1P46020 1223 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 TXNRD3Q86VQ6 643 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
RAB5C-207ENST00000550504 DUOX1Q9NRD9 1551 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
RAB5C-207ENST00000550504 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-207ENST00000550504 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 RTKN2Q8IZC4 609 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 PI4K2BQ8TCG2 481 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 FAM84BQ96KN1 310 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-207ENST00000550504 EYA3Q99504 573 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-207ENST00000550504 AOX1Q06278 1338 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 IRS2Q9Y4H2 1338 aa12.57□□□□□ -0.4
RAB5C-207ENST00000550504 ERC2O15083 957 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 GLRX3O76003 335 aaKnown RBP12.56□□□□□ -0.4
RAB5C-207ENST00000550504 ATP5JP18859 108 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
RAB5C-207ENST00000550504 WASHC4Q2M389 1173 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 C15orf52Q6ZUT6 534 aaKnown RBP12.56□□□□□ -0.4
RAB5C-207ENST00000550504 ZNF804AQ7Z570 1209 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 ZC3H12CQ9C0D7 883 aaKnown RBP12.56□□□□□ -0.4
RAB5C-207ENST00000550504 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 NDUFB9Q9Y6M9 179 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
RAB5C-207ENST00000550504 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 G3V3G9 751 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
RAB5C-207ENST00000550504 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB5C-207ENST00000550504 SCARF1Q14162 830 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 AOC3Q16853 763 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 DCAF8Q5TAQ9 597 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
RAB5C-207ENST00000550504 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-207ENST00000550504 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
RAB5C-207ENST00000550504 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
RAB5C-207ENST00000550504 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-207ENST00000550504 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 ARID4AP29374 1257 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-207ENST00000550504 MCAMP43121 646 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 RASSF7Q02833 373 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 RASGRF1Q13972 1273 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
RAB5C-207ENST00000550504 PSMD1Q99460 953 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
RAB5C-207ENST00000550504 ZNF277Q9NRM2 450 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-207ENST00000550504 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 NFKBIEO00221 500 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.45e-8■■■■□ 23.6
RAB5C-207ENST00000550504 ZAP70P43403 619 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 CHAF1AQ13111 956 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-207ENST00000550504 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-207ENST00000550504 HAUS7Q99871 368 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
RAB5C-207ENST00000550504 GOLIM4O00461 696 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 SDSP20132 328 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms