RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 SAGE1Q9NXZ1 904 aa16.21■□□□□ 0.19
LETMD1-222ENST00000550274 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.19
LETMD1-222ENST00000550274 USP17L3A6NCW0 530 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 USP17L4A6NCW7 530 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
LETMD1-222ENST00000550274 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 USP17L1Q7RTZ2 530 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 PODNQ7Z5L7 613 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
LETMD1-222ENST00000550274 GREM2Q9H772 168 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 RNF186Q9NXI6 227 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 MED23Q9ULK4 1368 aa16.2■□□□□ 0.18
LETMD1-222ENST00000550274 TRPA1O75762 1119 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 G2E3Q7L622 706 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 CSRNP1Q96S65 589 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 MXD3Q9BW11 206 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 MINPP1Q9UNW1 487 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
LETMD1-222ENST00000550274 NEURL1BA8MQ27 555 aa16.18■□□□□ 0.18
LETMD1-222ENST00000550274 CCDC184Q52MB2 194 aa16.18■□□□□ 0.18
LETMD1-222ENST00000550274 MOB2Q70IA6 237 aa16.18■□□□□ 0.18
LETMD1-222ENST00000550274 BSDC1Q9NW68 430 aaPredicted RBP16.18■□□□□ 0.18
LETMD1-222ENST00000550274 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
LETMD1-222ENST00000550274 NBPF9Q3BBW0 867 aa16.17■□□□□ 0.18
LETMD1-222ENST00000550274 DACT2Q5SW24 774 aa16.17■□□□□ 0.18
LETMD1-222ENST00000550274 UBE3BQ7Z3V4 1068 aa16.17■□□□□ 0.18
LETMD1-222ENST00000550274 TXNRD3Q86VQ6 643 aa16.17■□□□□ 0.18
LETMD1-222ENST00000550274 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
LETMD1-222ENST00000550274 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
LETMD1-222ENST00000550274 PRAMEF18Q5VWM3 479 aa16.16■□□□□ 0.18
LETMD1-222ENST00000550274 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
LETMD1-222ENST00000550274 LAMB1P07942 1786 aa16.15■□□□□ 0.18
LETMD1-222ENST00000550274 H7C1W4 665 aa16.15■□□□□ 0.18
LETMD1-222ENST00000550274 KLRK1P26718 216 aa16.15■□□□□ 0.18
LETMD1-222ENST00000550274 FKBP1BP68106 108 aa16.15■□□□□ 0.18
LETMD1-222ENST00000550274 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
LETMD1-222ENST00000550274 UBE2Q2LH0YL09 131 aa16.14■□□□□ 0.17
LETMD1-222ENST00000550274 WNT10BO00744 389 aa16.14■□□□□ 0.17
LETMD1-222ENST00000550274 WWC1Q8IX03 1113 aa16.14■□□□□ 0.17
LETMD1-222ENST00000550274 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
LETMD1-222ENST00000550274 SASH1O94885 1247 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 SLC34A2O95436 690 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 CASP7P55210 303 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 GCKRQ14397 625 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 CCDC27Q2M243 656 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 STRIP1Q5VSL9 837 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 COA1Q9GZY4 146 aa16.13■□□□□ 0.17
LETMD1-222ENST00000550274 ITGA6P23229 1130 aa16.12■□□□□ 0.17
LETMD1-222ENST00000550274 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
LETMD1-222ENST00000550274 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
LETMD1-222ENST00000550274 OGFOD1Q8N543 542 aa16.12■□□□□ 0.17
LETMD1-222ENST00000550274 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
LETMD1-222ENST00000550274 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
LETMD1-222ENST00000550274 ZNF804BA4D1E1 1349 aa16.12■□□□□ 0.17
LETMD1-222ENST00000550274 MYO3BQ8WXR4 1341 aa16.12■□□□□ 0.17
LETMD1-222ENST00000550274 SOX10P56693 466 aa16.11■□□□□ 0.17
LETMD1-222ENST00000550274 FLIIQ13045 1269 aa16.11■□□□□ 0.17
LETMD1-222ENST00000550274 CTU1Q7Z7A3 348 aaKnown RBP16.11■□□□□ 0.17
LETMD1-222ENST00000550274 CSF1RP07333 972 aa16.1■□□□□ 0.17
LETMD1-222ENST00000550274 TTLL12Q14166 644 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-222ENST00000550274 TTLL5Q6EMB2 1281 aa16.1■□□□□ 0.17
LETMD1-222ENST00000550274 KIAA0825Q8IV33 1275 aa16.1■□□□□ 0.17
LETMD1-222ENST00000550274 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 HTTP42858 3142 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 ARAP2Q8WZ64 1704 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 SNAP23O00161 211 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 GTF2IP78347 998 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 CHRNDQ07001 517 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 MKRN3Q13064 507 aaKnown RBP16.09■□□□□ 0.17
LETMD1-222ENST00000550274 FKBP5Q13451 457 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-222ENST00000550274 DNAAF4Q8WXU2 420 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 ZBED3Q96IU2 234 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-222ENST00000550274 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 ANKRD2Q9GZV1 360 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 IL16Q14005 1332 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 IRS2Q9Y4H2 1338 aa16.09■□□□□ 0.17
LETMD1-222ENST00000550274 TBC1D8O95759 1140 aa16.08■□□□□ 0.16
LETMD1-222ENST00000550274 LINS1Q8NG48 757 aa16.08■□□□□ 0.16
LETMD1-222ENST00000550274 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
LETMD1-222ENST00000550274 CENPFP49454 3210 aa16.07■□□□□ 0.16
LETMD1-222ENST00000550274 NF2P35240 595 aa16.07■□□□□ 0.16
LETMD1-222ENST00000550274 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
LETMD1-222ENST00000550274 PRKG1Q13976 671 aa16.07■□□□□ 0.16
LETMD1-222ENST00000550274 ZNF296Q8WUU4 475 aaPredicted RBP16.07■□□□□ 0.16
LETMD1-222ENST00000550274 CD209Q9NNX6 404 aa16.07■□□□□ 0.16
LETMD1-222ENST00000550274 FZD1Q9UP38 647 aa16.07■□□□□ 0.16
LETMD1-222ENST00000550274 SSC5DA1L4H1 1573 aa16.07■□□□□ 0.16
LETMD1-222ENST00000550274 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-222ENST00000550274 TAF5LO75529 589 aa16.06■□□□□ 0.16
LETMD1-222ENST00000550274 KCNJ4P48050 445 aa16.06■□□□□ 0.16
LETMD1-222ENST00000550274 TM4SF4P48230 202 aa16.06■□□□□ 0.16
LETMD1-222ENST00000550274 MMP14P50281 582 aa16.06■□□□□ 0.16
LETMD1-222ENST00000550274 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
LETMD1-222ENST00000550274 CERS5Q8N5B7 392 aa16.06■□□□□ 0.16
LETMD1-222ENST00000550274 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-222ENST00000550274 HDAC9Q9UKV0 1011 aa16.06■□□□□ 0.16
LETMD1-222ENST00000550274 HPS5Q9UPZ3 1129 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms