RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 LRRC24Q50LG9 513 aa32.34■■■□□ 2.77
CPSF6-205ENST00000550075 EAPPQ56P03 285 aaPredicted RBP32.34■■■□□ 2.77
CPSF6-205ENST00000550075 ZNF804AQ7Z570 1209 aa32.34■■■□□ 2.77
CPSF6-205ENST00000550075 LDHDQ86WU2 507 aa32.33■■■□□ 2.77
CPSF6-205ENST00000550075 SRGAP3O43295 1099 aa32.32■■■□□ 2.76
CPSF6-205ENST00000550075 KLRK1P26718 216 aa32.32■■■□□ 2.76
CPSF6-205ENST00000550075 TXNRD3Q86VQ6 643 aa32.32■■■□□ 2.76
CPSF6-205ENST00000550075 PANK1Q8TE04 598 aa32.32■■■□□ 2.76
CPSF6-205ENST00000550075 DPF2Q92785 391 aa32.32■■■□□ 2.76
CPSF6-205ENST00000550075 ADARB2Q9NS39 739 aaKnown RBP32.32■■■□□ 2.76
CPSF6-205ENST00000550075 ZNF609O15014 1411 aa32.32■■■□□ 2.76
CPSF6-205ENST00000550075 USP17L3A6NCW0 530 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 USP17L4A6NCW7 530 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 SNAP23O00161 211 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 CIAO1O76071 339 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 VIL1P09327 827 aaKnown RBP32.31■■■□□ 2.76
CPSF6-205ENST00000550075 EPS15P42566 896 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 USP17L1Q7RTZ2 530 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 KCNQ5Q9NR82 932 aa32.31■■■□□ 2.76
CPSF6-205ENST00000550075 CHADLQ6NUI6 762 aa32.3■■■□□ 2.76
CPSF6-205ENST00000550075 USP50Q70EL3 339 aaPredicted RBP32.3■■■□□ 2.76
CPSF6-205ENST00000550075 IRS2Q9Y4H2 1338 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 H7C1D1 291 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 PDE8BO95263 885 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 SIL1Q9H173 461 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 COPRSQ9NQ92 184 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 CLEC11AQ9Y240 323 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 ZBTB12Q9Y330 459 aaPredicted RBP32.29■■■□□ 2.76
CPSF6-205ENST00000550075 ADAMTSL1Q8N6G6 1762 aa32.29■■■□□ 2.76
CPSF6-205ENST00000550075 RSBN1LQ6PCB5 846 aaPredicted RBP32.28■■■□□ 2.76
CPSF6-205ENST00000550075 VGLL2Q8N8G2 317 aa32.27■■■□□ 2.76
CPSF6-205ENST00000550075 AGBL3Q8NEM8 1001 aa32.27■■■□□ 2.76
CPSF6-205ENST00000550075 FBXW7Q969H0 707 aa32.27■■■□□ 2.76
CPSF6-205ENST00000550075 CD209Q9NNX6 404 aa32.27■■■□□ 2.76
CPSF6-205ENST00000550075 CNOT7Q9UIV1 285 aaKnown RBP32.27■■■□□ 2.76
CPSF6-205ENST00000550075 ZBTB7BO15156 539 aaPredicted RBP32.26■■■□□ 2.75
CPSF6-205ENST00000550075 POTEIP0CG38 1075 aa32.26■■■□□ 2.75
CPSF6-205ENST00000550075 POTEJP0CG39 1038 aa32.26■■■□□ 2.75
CPSF6-205ENST00000550075 IL15P40933 162 aaPredicted RBP32.26■■■□□ 2.75
CPSF6-205ENST00000550075 PUM3Q15397 648 aaKnown RBP32.26■■■□□ 2.75
CPSF6-205ENST00000550075 STRIP1Q5VSL9 837 aa32.26■■■□□ 2.75
CPSF6-205ENST00000550075 MICALL2Q8IY33 904 aa32.26■■■□□ 2.75
CPSF6-205ENST00000550075 MYO3BQ8WXR4 1341 aa32.26■■■□□ 2.75
CPSF6-205ENST00000550075 HSPA6P17066 643 aa32.25■■■□□ 2.75
CPSF6-205ENST00000550075 MVPQ14764 893 aaKnown RBP32.25■■■□□ 2.75
CPSF6-205ENST00000550075 CHMP4BQ9H444 224 aaKnown RBP32.25■■■□□ 2.75
CPSF6-205ENST00000550075 DDX19BQ9UMR2 479 aa32.25■■■□□ 2.75
CPSF6-205ENST00000550075 PA2G4Q9UQ80 394 aaKnown RBP32.25■■■□□ 2.75
CPSF6-205ENST00000550075 ATG9AQ7Z3C6 839 aa32.24■■■□□ 2.75
CPSF6-205ENST00000550075 CEP126Q9P2H0 1117 aa32.24■■■□□ 2.75
CPSF6-205ENST00000550075 IFIT1P09914 478 aaKnown RBP32.23■■■□□ 2.75
CPSF6-205ENST00000550075 PDE3AQ14432 1141 aa32.23■■■□□ 2.75
CPSF6-205ENST00000550075 ZNF646O15015 1829 aaPredicted RBP32.23■■■□□ 2.75
CPSF6-205ENST00000550075 IL1R1P14778 569 aa32.22■■■□□ 2.75
CPSF6-205ENST00000550075 HIBADHP31937 336 aaKnown RBP32.22■■■□□ 2.75
CPSF6-205ENST00000550075 CAVIN4Q5BKX8 364 aa32.22■■■□□ 2.75
CPSF6-205ENST00000550075 DACT2Q5SW24 774 aa32.22■■■□□ 2.75
CPSF6-205ENST00000550075 VPS37DQ86XT2 251 aa32.22■■■□□ 2.75
CPSF6-205ENST00000550075 SLC5A1P13866 664 aa32.21■■■□□ 2.75
CPSF6-205ENST00000550075 TTLL5Q6EMB2 1281 aa32.21■■■□□ 2.75
CPSF6-205ENST00000550075 C1orf115Q9H7X2 142 aa32.21■■■□□ 2.75
CPSF6-205ENST00000550075 GTF2IP78347 998 aa32.2■■■□□ 2.75
CPSF6-205ENST00000550075 LPIN2Q92539 896 aa32.2■■■□□ 2.75
CPSF6-205ENST00000550075 COG6Q9Y2V7 657 aa32.2■■■□□ 2.75
CPSF6-205ENST00000550075 PNMA6EA0A0J9YXQ4 647 aa32.19■■■□□ 2.74
CPSF6-205ENST00000550075 GYG1P46976 350 aa32.19■■■□□ 2.74
CPSF6-205ENST00000550075 FAM84BQ96KN1 310 aaPredicted RBP32.19■■■□□ 2.74
CPSF6-205ENST00000550075 FGFR2P21802 821 aa32.18■■■□□ 2.74
CPSF6-205ENST00000550075 ATP2B3Q16720 1220 aa32.18■■■□□ 2.74
CPSF6-205ENST00000550075 TRPM4Q8TD43 1214 aa32.18■■■□□ 2.74
CPSF6-205ENST00000550075 GMLQ99445 158 aa32.18■■■□□ 2.74
CPSF6-205ENST00000550075 USP17L8P0C7I0 530 aa32.17■■■□□ 2.74
CPSF6-205ENST00000550075 MMP14P50281 582 aa32.17■■■□□ 2.74
CPSF6-205ENST00000550075 APLP1P51693 650 aa32.17■■■□□ 2.74
CPSF6-205ENST00000550075 ATP8B2P98198 1209 aa32.17■■■□□ 2.74
CPSF6-205ENST00000550075 SHTN1A0MZ66 631 aa32.16■■■□□ 2.74
CPSF6-205ENST00000550075 OGFOD1Q8N543 542 aa32.16■■■□□ 2.74
CPSF6-205ENST00000550075 ZC3H15Q8WU90 426 aaKnown RBP32.16■■■□□ 2.74
CPSF6-205ENST00000550075 ZNF280AP59817 542 aaPredicted RBP32.15■■■□□ 2.74
CPSF6-205ENST00000550075 G3BP1Q13283 466 aaKnown RBP eCLIP32.15■■■□□ 2.74
CPSF6-205ENST00000550075 POLA2Q14181 598 aa32.15■■■□□ 2.74
CPSF6-205ENST00000550075 TBC1D10BQ4KMP7 808 aaPredicted RBP32.15■■■□□ 2.74
CPSF6-205ENST00000550075 FBXO33Q7Z6M2 555 aa32.15■■■□□ 2.74
CPSF6-205ENST00000550075 TDRD7Q8NHU6 1098 aaKnown RBP32.15■■■□□ 2.74
CPSF6-205ENST00000550075 SSH3Q8TE77 659 aa32.15■■■□□ 2.74
CPSF6-205ENST00000550075 SASH1O94885 1247 aa32.14■■■□□ 2.74
CPSF6-205ENST00000550075 KIF4BQ2VIQ3 1234 aa32.14■■■□□ 2.74
CPSF6-205ENST00000550075 MAP1SQ66K74 1059 aaPredicted RBP32.14■■■□□ 2.74
CPSF6-205ENST00000550075 SAMD7Q7Z3H4 446 aa32.14■■■□□ 2.74
CPSF6-205ENST00000550075 AKAP2Q9Y2D5 859 aa32.14■■■□□ 2.74
CPSF6-205ENST00000550075 ARAP2Q8WZ64 1704 aa32.14■■■□□ 2.74
CPSF6-205ENST00000550075 FRAT2O75474 233 aaPredicted RBP32.13■■■□□ 2.73
CPSF6-205ENST00000550075 FKBP1AP62942 108 aaKnown RBP32.13■■■□□ 2.73
CPSF6-205ENST00000550075 FAM205AQ6ZU69 1335 aa32.13■■■□□ 2.73
CPSF6-205ENST00000550075 CNTROBQ8N137 903 aa32.13■■■□□ 2.73
CPSF6-205ENST00000550075 HDAC9Q9UKV0 1011 aa32.13■■■□□ 2.73
CPSF6-205ENST00000550075 CEP85Q6P2H3 762 aa32.12■■■□□ 2.73
CPSF6-205ENST00000550075 MXD3Q9BW11 206 aa32.12■■■□□ 2.73
CPSF6-205ENST00000550075 MYH13Q9UKX3 1938 aa32.11■■■□□ 2.73
CPSF6-205ENST00000550075 OS9Q13438 667 aaPredicted RBP32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms