RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 CWC25Q9NXE8 425 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-207ENST00000550051 MMP14P50281 582 aa12.73□□□□□ -0.37
TRAFD1-207ENST00000550051 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
TRAFD1-207ENST00000550051 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 CTU1Q7Z7A3 348 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 BSDC1Q9NW68 430 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-207ENST00000550051 APAF1O14727 1248 aa12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 TM4SF4P48230 202 aa12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 TTLL11Q8NHH1 800 aa12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
TRAFD1-207ENST00000550051 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.38
TRAFD1-207ENST00000550051 WTIPA6NIX2 430 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 CTSWP56202 376 aa12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 NOM1Q5C9Z4 860 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 STRIP1Q5VSL9 837 aa12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 KSR2Q6VAB6 950 aa12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 OGFOD1Q8N543 542 aa12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
TRAFD1-207ENST00000550051 UBE2Q2LH0YL09 131 aa12.69□□□□□ -0.38
TRAFD1-207ENST00000550051 IGKV5-2P06315 115 aa12.69□□□□□ -0.38
TRAFD1-207ENST00000550051 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
TRAFD1-207ENST00000550051 COA1Q9GZY4 146 aa12.69□□□□□ -0.38
TRAFD1-207ENST00000550051 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
TRAFD1-207ENST00000550051 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
TRAFD1-207ENST00000550051 MYH3P11055 1940 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 H7C1W4 665 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 WNT10BO00744 389 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 PRKRIP1Q9H875 184 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 PDE4DIPQ5VU43 2346 aa12.68□□□□□ -0.38
TRAFD1-207ENST00000550051 ZNF646O15015 1829 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 TBC1D8O95759 1140 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 SOX10P56693 466 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 GREM2Q9H772 168 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
TRAFD1-207ENST00000550051 NF2P35240 595 aa12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 TXNRD3Q86VQ6 643 aa12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 ZNF296Q8WUU4 475 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-207ENST00000550051 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 GPR25O00155 361 aa12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 CSF1RP07333 972 aa12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 TTLL5Q6EMB2 1281 aa12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 ZBED3Q96IU2 234 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
TRAFD1-207ENST00000550051 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 IGHMBP2P38935 993 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 INHBEP58166 350 aa12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 PTPN12Q05209 780 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 SREBF2Q12772 1141 aa12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 CWF19L2Q2TBE0 894 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 SPEF2Q9C093 1822 aa12.64□□□□□ -0.39
TRAFD1-207ENST00000550051 GCKRQ14397 625 aa12.63□□□□□ -0.39
TRAFD1-207ENST00000550051 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
TRAFD1-207ENST00000550051 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-207ENST00000550051 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-207ENST00000550051 UBE3BQ7Z3V4 1068 aa12.63□□□□□ -0.39
TRAFD1-207ENST00000550051 CACNA1FO60840 1977 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 ITGA6P23229 1130 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 CASP7P55210 303 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 GTF2IP78347 998 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 SPRYD7Q5W111 196 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 C15orf52Q6ZUT6 534 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 G2E3Q7L622 706 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 MPHOSPH8Q99549 860 aa12.62□□□□□ -0.39
TRAFD1-207ENST00000550051 FKTNO75072 461 aa12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 SASH1O94885 1247 aa12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 KIAA0825Q8IV33 1275 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms