RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MXD3Q9BW11 206 aa19.8■□□□□ 0.76
RAB5C-205ENST00000550013 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
RAB5C-205ENST00000550013 BSDC1Q9NW68 430 aaPredicted RBP19.8■□□□□ 0.76
RAB5C-205ENST00000550013 RNF186Q9NXI6 227 aa19.8■□□□□ 0.76
RAB5C-205ENST00000550013 SAGE1Q9NXZ1 904 aa19.8■□□□□ 0.76
RAB5C-205ENST00000550013 NEURL1BA8MQ27 555 aa19.79■□□□□ 0.76
RAB5C-205ENST00000550013 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
RAB5C-205ENST00000550013 RASAL3Q86YV0 1011 aa19.79■□□□□ 0.76
RAB5C-205ENST00000550013 CSRNP1Q96S65 589 aa19.79■□□□□ 0.76
RAB5C-205ENST00000550013 PITPNM2Q9BZ72 1349 aa19.78■□□□□ 0.76
RAB5C-205ENST00000550013 CCT4P50991 539 aaKnown RBP19.78■□□□□ 0.76
RAB5C-205ENST00000550013 TWISTNBQ3B726 338 aaPredicted RBP19.78■□□□□ 0.76
RAB5C-205ENST00000550013 DACT2Q5SW24 774 aa19.78■□□□□ 0.76
RAB5C-205ENST00000550013 MOB2Q70IA6 237 aa19.78■□□□□ 0.76
RAB5C-205ENST00000550013 H7C1W4 665 aa19.77■□□□□ 0.76
RAB5C-205ENST00000550013 NBPF9Q3BBW0 867 aa19.77■□□□□ 0.76
RAB5C-205ENST00000550013 PRAMEF18Q5VWM3 479 aa19.77■□□□□ 0.76
RAB5C-205ENST00000550013 TXNRD3Q86VQ6 643 aa19.77■□□□□ 0.76
RAB5C-205ENST00000550013 FBXW7Q969H0 707 aa19.77■□□□□ 0.76
RAB5C-205ENST00000550013 TNRC18O15417 2968 aaPredicted RBP19.77■□□□□ 0.75
RAB5C-205ENST00000550013 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
RAB5C-205ENST00000550013 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
RAB5C-205ENST00000550013 UBE2Q2LH0YL09 131 aa19.75■□□□□ 0.75
RAB5C-205ENST00000550013 KLRK1P26718 216 aa19.75■□□□□ 0.75
RAB5C-205ENST00000550013 FKBP1BP68106 108 aa19.75■□□□□ 0.75
RAB5C-205ENST00000550013 IGHMBP2P38935 993 aaKnown RBP19.74■□□□□ 0.75
RAB5C-205ENST00000550013 GCKRQ14397 625 aa19.74■□□□□ 0.75
RAB5C-205ENST00000550013 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
RAB5C-205ENST00000550013 COA1Q9GZY4 146 aa19.74■□□□□ 0.75
RAB5C-205ENST00000550013 WNT10BO00744 389 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 SASH1O94885 1247 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 ITGA6P23229 1130 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 CASP7P55210 303 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 FLIIQ13045 1269 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 STRIP1Q5VSL9 837 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 LEMD3Q9Y2U8 911 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 CACNA1FO60840 1977 aa19.73■□□□□ 0.75
RAB5C-205ENST00000550013 OGFOD1Q8N543 542 aa19.72■□□□□ 0.75
RAB5C-205ENST00000550013 PLA2G12BQ9BX93 195 aa19.72■□□□□ 0.75
RAB5C-205ENST00000550013 ZNF804BA4D1E1 1349 aa19.72■□□□□ 0.75
RAB5C-205ENST00000550013 MYO3BQ8WXR4 1341 aa19.72■□□□□ 0.75
RAB5C-205ENST00000550013 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
RAB5C-205ENST00000550013 TTLL12Q14166 644 aaPredicted RBP19.71■□□□□ 0.75
RAB5C-205ENST00000550013 REM2Q8IYK8 340 aaPredicted RBP19.71■□□□□ 0.75
RAB5C-205ENST00000550013 IL16Q14005 1332 aa19.71■□□□□ 0.75
RAB5C-205ENST00000550013 A0A1B0GUL6 1792 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 CSF1RP07333 972 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 TTLL5Q6EMB2 1281 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 DNAAF4Q8WXU2 420 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 MPHOSPH8Q99549 860 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 ANKRD2Q9GZV1 360 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
RAB5C-205ENST00000550013 GTF2IP78347 998 aa19.69■□□□□ 0.74
RAB5C-205ENST00000550013 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
RAB5C-205ENST00000550013 LINS1Q8NG48 757 aa19.69■□□□□ 0.74
RAB5C-205ENST00000550013 MYH16Q9H6N6 1097 aa19.69■□□□□ 0.74
RAB5C-205ENST00000550013 PDE4DIPQ5VU43 2346 aa19.69■□□□□ 0.74
RAB5C-205ENST00000550013 SNAP23O00161 211 aa19.68■□□□□ 0.74
RAB5C-205ENST00000550013 KCNJ4P48050 445 aa19.68■□□□□ 0.74
RAB5C-205ENST00000550013 SOX10P56693 466 aa19.68■□□□□ 0.74
RAB5C-205ENST00000550013 CHRNDQ07001 517 aa19.68■□□□□ 0.74
RAB5C-205ENST00000550013 MKRN3Q13064 507 aaKnown RBP19.68■□□□□ 0.74
RAB5C-205ENST00000550013 CTU1Q7Z7A3 348 aaKnown RBP19.68■□□□□ 0.74
RAB5C-205ENST00000550013 SLC34A2O95436 690 aa19.67■□□□□ 0.74
RAB5C-205ENST00000550013 PRKG1Q13976 671 aa19.67■□□□□ 0.74
RAB5C-205ENST00000550013 TBC1D8O95759 1140 aa19.66■□□□□ 0.74
RAB5C-205ENST00000550013 NF2P35240 595 aa19.66■□□□□ 0.74
RAB5C-205ENST00000550013 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
RAB5C-205ENST00000550013 ZBED3Q96IU2 234 aaPredicted RBP19.66■□□□□ 0.74
RAB5C-205ENST00000550013 CD209Q9NNX6 404 aa19.66■□□□□ 0.74
RAB5C-205ENST00000550013 HDAC9Q9UKV0 1011 aa19.66■□□□□ 0.74
RAB5C-205ENST00000550013 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
RAB5C-205ENST00000550013 IRS2Q9Y4H2 1338 aa19.66■□□□□ 0.74
RAB5C-205ENST00000550013 ANKRD18BA2A2Z9 1011 aa19.65■□□□□ 0.74
RAB5C-205ENST00000550013 VAMP4O75379 141 aa19.65■□□□□ 0.74
RAB5C-205ENST00000550013 TAF5LO75529 589 aa19.65■□□□□ 0.74
RAB5C-205ENST00000550013 MMP14P50281 582 aa19.65■□□□□ 0.74
RAB5C-205ENST00000550013 PTPN12Q05209 780 aaKnown RBP19.65■□□□□ 0.74
RAB5C-205ENST00000550013 APOBEC3FQ8IUX4 373 aaKnown RBP19.65■□□□□ 0.74
RAB5C-205ENST00000550013 CERS5Q8N5B7 392 aa19.65■□□□□ 0.74
RAB5C-205ENST00000550013 F6X3S4 739 aa19.64■□□□□ 0.73
RAB5C-205ENST00000550013 FOXO4P98177 505 aa19.64■□□□□ 0.73
RAB5C-205ENST00000550013 EXOSC9Q06265 439 aaKnown RBP19.64■□□□□ 0.73
RAB5C-205ENST00000550013 ZNF296Q8WUU4 475 aaPredicted RBP19.64■□□□□ 0.73
RAB5C-205ENST00000550013 FZD1Q9UP38 647 aa19.64■□□□□ 0.73
RAB5C-205ENST00000550013 ECM29Q5VYK3 1845 aa19.64■□□□□ 0.73
RAB5C-205ENST00000550013 TM4SF4P48230 202 aa19.63■□□□□ 0.73
RAB5C-205ENST00000550013 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
RAB5C-205ENST00000550013 ARMC9Q7Z3E5 817 aa19.63■□□□□ 0.73
RAB5C-205ENST00000550013 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
RAB5C-205ENST00000550013 CHMP3Q9Y3E7 222 aa19.63■□□□□ 0.73
RAB5C-205ENST00000550013 PCDHAC2Q9Y5I4 1007 aa19.63■□□□□ 0.73
RAB5C-205ENST00000550013 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
RAB5C-205ENST00000550013 ANGEL1Q9UNK9 670 aaKnown RBP19.62■□□□□ 0.73
RAB5C-205ENST00000550013 HPS5Q9UPZ3 1129 aa19.62■□□□□ 0.73
RAB5C-205ENST00000550013 DLGAP5Q15398 846 aa19.61■□□□□ 0.73
RAB5C-205ENST00000550013 EPHA10Q5JZY3 1008 aa19.61■□□□□ 0.73
RAB5C-205ENST00000550013 BEND3Q5T5X7 828 aa19.61■□□□□ 0.73
RAB5C-205ENST00000550013 LDLRAD1Q5T700 205 aa19.61■□□□□ 0.73
RAB5C-205ENST00000550013 C15orf52Q6ZUT6 534 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms