RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 FPGT-TNNI3KV9GXZ4 949 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 COL15A1P39059 1388 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 MYH15Q9Y2K3 1946 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 PHKG2P15735 406 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 BMS1Q14692 1282 aaKnown RBP14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 ELF2Q15723 593 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 COPRSQ9NQ92 184 aa14.92□□□□□ -0.02
CALCOCO1-217ENST00000549935 SCN11AQ9UI33 1791 aa14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 ZNF142P52746 1687 aaPredicted RBP14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 KINO60870 393 aaKnown RBP14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 HMGB1P09429 215 aaKnown RBP14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 ATP5JP18859 108 aa14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 PTPN12Q05209 780 aaKnown RBP14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 CCDC129Q6ZRS4 1044 aa14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 Q6ZUG5 572 aa14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 CCDC150Q8NCX0 1101 aa14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 ZNF396Q96N95 335 aaPredicted RBP14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 GOLPH3LQ9H4A5 285 aa14.91□□□□□ -0.02
CALCOCO1-217ENST00000549935 ATP5J2-PTCD1G3V325 749 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 PTCD1O75127 700 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 TATP17735 454 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 RFX5P48382 616 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 SCRN1Q12765 414 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 FILIP1Q7Z7B0 1213 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 TTC5Q8N0Z6 440 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 LRP10Q7Z4F1 713 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 TICAM2Q86XR7 235 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 NSUN7Q8NE18 718 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 CHMP4CQ96CF2 233 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 SEC62Q99442 399 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 AGXT2Q9BYV1 514 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 ZNF446Q9NWS9 450 aa14.9□□□□□ -0.02
CALCOCO1-217ENST00000549935 ZNF609O15014 1411 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 SNRPA1P09661 255 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 DBNDD2Q9BQY9 259 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 MEGF6O75095 1541 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 A0A087WZG4 1122 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 A0A1W2PQ27 194 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 A0A1W2PQ64 194 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 A0A1W2PQD8 194 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 HSP90B1P14625 803 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 DDX46Q7L014 1031 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 TRMT1Q9NXH9 659 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 CALCOCO1Q9P1Z2 691 aa14.89□□□□□ -0.03
CALCOCO1-217ENST00000549935 AFDNP55196 1824 aaKnown RBP14.88□□□□□ -0.03
CALCOCO1-217ENST00000549935 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
CALCOCO1-217ENST00000549935 IFNL2Q8IZJ0 200 aa14.88□□□□□ -0.03
CALCOCO1-217ENST00000549935 FMR1NBQ8N0W7 255 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-217ENST00000549935 USP28Q96RU2 1077 aa14.88□□□□□ -0.03
CALCOCO1-217ENST00000549935 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
CALCOCO1-217ENST00000549935 RABL6Q3YEC7 729 aaPredicted RBP14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 AOPEPQ8N6M6 819 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 PPP1R13BQ96KQ4 1090 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 TIGD1Q96MW7 591 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 TMEM51Q9NW97 253 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 ABCC6O95255 1503 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 C1orf167Q5SNV9 1468 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 CCP110O43303 1012 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 CTDNEP1O95476 244 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 CYP21A2P08686 494 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 ADALQ6DHV7 355 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 DHX32Q7L7V1 743 aaKnown RBP14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 LRRC2Q9BYS8 371 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 FHOD1Q9Y613 1164 aa14.87□□□□□ -0.03
CALCOCO1-217ENST00000549935 A0A0U1RQG5 324 aaPredicted RBP14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 NRDCO43847 1150 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 MCMDC2Q4G0Z9 681 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 FSIP1Q8NA03 581 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 MRPS27Q92552 414 aaKnown RBP14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 HAUS7Q99871 368 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 RTEL1Q9NZ71 1219 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.86□□□□□ -0.035e-6■■■□□ 17
CALCOCO1-217ENST00000549935 V9GYY5 206 aaPredicted RBP14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 CYP27B1O15528 508 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 CYP2C19P33261 490 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 FGD1P98174 961 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 ARMCX5Q6P1M9 558 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 LMBR1LQ6UX01 489 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 PHLPP2Q6ZVD8 1323 aa14.86□□□□□ -0.03
CALCOCO1-217ENST00000549935 PTPDC1A2A3K4 754 aa14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 ATP8B1O43520 1251 aa14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 EXOSC10Q01780 885 aaKnown RBP14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 FBXL16Q8N461 479 aa14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 NOL10Q9BSC4 688 aaKnown RBP14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 SRRTQ9BXP5 876 aaKnown RBP14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 KIAA1468Q9P260 1216 aa14.85□□□□□ -0.03
CALCOCO1-217ENST00000549935 SH3TC1Q8TE82 1336 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms